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Selected Module: B_14_22
Module Info
| Module_Name | B_14_22 |
| Cell_Type | B |
| Name | B_14_22: Processing of Capped Intron-Containing Pre-mRNA |
| Meta_Module | B_3 |
| Gene_Number | 44 |
Genes:
AAMP, ADPRS, ARPC1A, BAX, CDK9, CISD3, CZIB, DTD1, ECHDC1, EED, ELP5, EMG1, ERI3, GLRX2, GPN1, GTF2E2, GTF2H5, HAUS1, HTATSF1, ITGB3BP, MAP7D1, MPHOSPH6, NPRL2, PCBP1, PIN4, PLRG1, PRKD2, PRPF19, PSMG2, RAB11B, RAE1, RALA, RBFA, SF3B4, SIT1, SNRNP70, SRRT, SURF2, SZRD1, TAF10, TMSB10, TRAF7, USP39, ZCCHC17
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| GABP | 0.00099194550588209 | CDK9/EMG1/PCBP1/RAB11B/SF3B4/TAF10 |
| MCM2 | 0.0499319310762962 | AAMP/NPRL2/RALA |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_14_22 | R-HSA-167162 | RNA Polymerase II HIV Promoter Escape | 3/28 | 47/11146 | 0.00021380582545113 | 0.00361825243071151 | 0.00309888605309742 | GTF2E2/GTF2H5/TAF10 | 3 |
| reactome | B_14_22 | R-HSA-73776 | RNA Polymerase II Promoter Escape | 3/28 | 47/11146 | 0.00021380582545113 | 0.00361825243071151 | 0.00309888605309742 | GTF2E2/GTF2H5/TAF10 | 3 |
| reactome | B_14_22 | R-HSA-73779 | RNA Polymerase II Transcription Pre-Initiation And Promoter Opening | 3/28 | 47/11146 | 0.00021380582545113 | 0.00361825243071151 | 0.00309888605309742 | GTF2E2/GTF2H5/TAF10 | 3 |
| reactome | B_14_22 | R-HSA-75953 | RNA Polymerase II Transcription Initiation | 3/28 | 47/11146 | 0.00021380582545113 | 0.00361825243071151 | 0.00309888605309742 | GTF2E2/GTF2H5/TAF10 | 3 |
| reactome | B_14_22 | R-HSA-76042 | RNA Polymerase II Transcription Initiation And Promoter Clearance | 3/28 | 47/11146 | 0.00021380582545113 | 0.00361825243071151 | 0.00309888605309742 | GTF2E2/GTF2H5/TAF10 | 3 |
| hallmark | B_14_22 | HALLMARK_DNA_REPAIR | HALLMARK_DNA_REPAIR | 4/10 | 150/4384 | 0.00023546678130017 | 0.00211920103170159 | 0.00198287815831728 | GTF2H5/RAE1/RALA/TAF10 | 4 |
| reactome | B_14_22 | R-HSA-162906 | HIV Infection | 5/28 | 231/11146 | 0.00024372781777146 | 0.00383000856498013 | 0.00328024657000691 | CDK9/GTF2E2/GTF2H5/RAE1/TAF10 | 5 |
| GO | B_14_22 | GO:0005662 | DNA replication factor A complex | 2/41 | 13/19960 | 0.00031653046417504 | 0.00506448742680068 | 0.00337354836818138 | PLRG1/PRPF19 | 2 |
| GO | B_14_22 | GO:0000974 | Prp19 complex | 2/41 | 14/19960 | 0.00036880512600762 | 0.00524522845877513 | 0.00349394329901962 | PLRG1/PRPF19 | 2 |
| GO | B_14_22 | GO:0006367 | transcription initiation at RNA polymerase II promoter | 4/42 | 167/18986 | 0.00049804453378485 | 0.0372039266737288 | 0.0326612362682069 | CDK9/GTF2E2/GTF2H5/TAF10 | 4 |