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Selected Module: B_13_9


Module Info

Module_Name B_13_9
Cell_Type B
Name B_13_9: paraspeckles
Meta_Module B_23
Gene_Number 18

Genes:

BORCS8, CNOT9, CPSF6, CYREN, DESI2, DLD, DPP3, HNRNPM, IDH3B, POLR2K, PPP5C, SPATC1L, TARBP2, THG1L, THUMPD3, TMEM199, WDR5, ZDHHC16


UMAP Visualizations


UMAP for B_13_9

UMAP for B_13_9


Word Cloud

Enriched TF

Wordcloud for B_13_9
No TF enriched


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
reactome B_13_9 R-HSA-1226099 Signaling by FGFR in disease 2/11 63/11146 0.00167351157214143 0.0362594173963976 0.0161479186785577 CPSF6/POLR2K 2
reactome B_13_9 R-HSA-5654738 Signaling by FGFR2 2/11 73/11146 0.00223981961046482 0.0380852860877859 0.0169610585816051 HNRNPM/POLR2K 2
reactome B_13_9 R-HSA-72203 Processing of Capped Intron-Containing Pre-mRNA 3/11 285/11146 0.00234370991309452 0.0380852860877859 0.0169610585816051 CPSF6/HNRNPM/POLR2K 3
reactome B_13_9 R-HSA-9006931 Signaling by Nuclear Receptors 3/11 298/11146 0.00266162737029145 0.0384457286819876 0.0171215795749742 DLD/POLR2K/PPP5C 3
reactome B_13_9 R-HSA-190236 Signaling by FGFR 2/11 89/11146 0.00330893597895204 0.0430161677263765 0.0191569977728802 HNRNPM/POLR2K 2
KEGG B_13_9 hsa01200 Carbon metabolism 2/8 116/8541 0.0048541364017801 0.0420691821487609 0.0238448805701479 DLD/IDH3B 2
hallmark B_13_9 HALLMARK_DNA_REPAIR HALLMARK_DNA_REPAIR 2/5 150/4384 0.0108653944032605 0.0360439405264845 0.0189704950139392 POLR2K/TARBP2 2
hallmark B_13_9 HALLMARK_FATTY_ACID_METABOLISM HALLMARK_FATTY_ACID_METABOLISM 2/5 158/4384 0.0120146468421615 0.0360439405264845 0.0189704950139392 DLD/IDH3B 2
hallmark B_13_9 HALLMARK_OXIDATIVE_PHOSPHORYLATION HALLMARK_OXIDATIVE_PHOSPHORYLATION 2/5 200/4384 0.0189034620878385 0.037806924175677 0.0198983811450931 DLD/IDH3B 2