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Selected Module: B_13_9


Module Info

Module_Name B_13_9
Cell_Type B
Name B_13_9: paraspeckles
Meta_Module B_23
Gene_Number 18

Genes:

BORCS8, CNOT9, CPSF6, CYREN, DESI2, DLD, DPP3, HNRNPM, IDH3B, POLR2K, PPP5C, SPATC1L, TARBP2, THG1L, THUMPD3, TMEM199, WDR5, ZDHHC16


UMAP Visualizations


UMAP for B_13_9

UMAP for B_13_9


Word Cloud

Enriched TF

Wordcloud for B_13_9
No TF enriched


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
GO B_13_9 GO:0042382 paraspeckles 2/18 10/19960 3.44173501369692e-05 0.00258130126027269 0.00152160916395022 CPSF6/HNRNPM 2
GO B_13_9 GO:0045239 tricarboxylic acid cycle heteromeric enzyme complex 2/18 17/19960 0.00010362848216731 0.0038860680812742 0.00229073486896163 DLD/IDH3B 2
WikiPathways B_13_9 WP78 TCA cycle aka Krebs or citric acid cycle 2/8 18/8836 0.00010896059582353 0.00326881787470616 0.00194982118842122 DLD/IDH3B 2
reactome B_13_9 R-HSA-5617472 Activation of anterior HOX genes in hindbrain development during early embryogenesis 3/11 121/11146 0.00019324056639161 0.00923308749773487 0.00411190131478071 CNOT9/POLR2K/WDR5 3
reactome B_13_9 R-HSA-5619507 Activation of HOX genes during differentiation 3/11 121/11146 0.00019324056639161 0.00923308749773487 0.00411190131478071 CNOT9/POLR2K/WDR5 3
reactome B_13_9 R-HSA-203927 MicroRNA (miRNA) biogenesis 2/11 24/11146 0.00024152221798548 0.00923308749773487 0.00411190131478071 POLR2K/TARBP2 2
reactome B_13_9 R-HSA-6803529 FGFR2 alternative splicing 2/11 26/11146 0.0002840949999303 0.00923308749773487 0.00411190131478071 HNRNPM/POLR2K 2
KEGG B_13_9 hsa00020 Citrate cycle (TCA cycle) 2/8 30/8541 0.0003296178968731 0.00519383110862272 0.00294387188342988 DLD/IDH3B 2
KEGG B_13_9 hsa01210 2-Oxocarboxylic acid metabolism 2/8 33/8541 0.00039952546989405 0.00519383110862272 0.00294387188342988 DLD/IDH3B 2
reactome B_13_9 R-HSA-71403 Citric acid cycle (TCA cycle) 2/11 34/11146 0.00048828343084549 0.0126953692019828 0.005653808146632 DLD/IDH3B 2