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Selected Module: B_13_5
Module Info
| Module_Name | B_13_5 |
| Cell_Type | B |
| Name | B_13_5: Spliceosomes |
| Meta_Module | B_9 |
| Gene_Number | 49 |
Genes:
ACAT2, ANP32E, ARHGDIA, BCCIP, C8orf33, CBX5, CENPH, CENPM, CKAP2, CKS1B, DNMT1, DYNC2I2, EIF1AX, EIF4A1, H2AZ2, H4C3, HMGB1, HMGN1, HNRNPA2B1, HNRNPD, HNRNPR, HSPH1, KIF20B, LSM7, MCMBP, MYBL2, NCAPH2, POLR3K, PPIH, PTBP1, PTGES3, PUM3, RBM14, RBM8A, RFC2, SAE1, SMC2, SMC3, SNRPD1, SQLE, SRSF2, SSB, TACC3, TFAM, TUBB, TUBB4B, USP1, YWHAQ, ZPR1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| E2F1DP1RB | 2.29169207565885e-09 | CBX5/DNMT1/EIF1AX/EIF4A1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1/SRSF2 |
| E2F4DP1 | 2.29169207565885e-09 | DNMT1/EIF1AX/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F1DP1 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F1DP2 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F4DP2 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F | 1.94556737821906e-08 | ANP32E/CBX5/DNMT1/EIF1AX/HNRNPD/SMC2/SMC3/SRSF2/YWHAQ |
| E2F1 | 2.39174813594465e-07 | CBX5/DNMT1/HNRNPD/SMC2/SMC3/SRSF2/USP1/YWHAQ |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_13_5 | D038761 | D038761 | 3/49 | 50/26076 | 0.00011484907978665 | 0.00563990584735438 | 0.00453001625222414 | CENPH/SRSF2/SSB | 3 |
| GO | B_13_5 | GO:0043484 | regulation of RNA splicing | 5/48 | 190/18986 | 0.00011500005567493 | 0.0051622247214083 | 0.00416959266189831 | HNRNPA2B1/PTBP1/RBM8A/SRSF2/ZPR1 | 5 |
| MeSH_gene2pubmed | B_13_5 | D013539 | Simian virus 40 | 6/49 | 410/26076 | 0.00011503107307141 | 0.00563990584735438 | 0.00453001625222414 | DNMT1/HMGN1/MYBL2/RBM8A/RFC2/SRSF2 | 6 |
| MeSH_gene2pubmed | B_13_5 | D022003 | Cell Nucleus Structures | 4/49 | 136/26076 | 0.00012501857611 | 0.00595445618215354 | 0.00478266552817814 | HNRNPA2B1/RBM8A/SAE1/SRSF2 | 4 |
| GO | B_13_5 | GO:0000070 | mitotic sister chromatid segregation | 5/48 | 194/18986 | 0.00012680664541735 | 0.00539261944722208 | 0.00435568532735499 | BCCIP/MYBL2/NCAPH2/SMC2/SMC3 | 5 |
| MeSH_gene2pubmed | B_13_5 | D017361 | Viral Nonstructural Proteins | 5/49 | 264/26076 | 0.00013571635173813 | 0.00628442106520729 | 0.00504769588920763 | EIF4A1/HNRNPR/SNRPD1/SRSF2/SSB | 5 |
| reactome | B_13_5 | R-HSA-2299718 | Condensation of Prophase Chromosomes | 4/41 | 73/11146 | 0.00014277082554685 | 0.00619922217514096 | 0.00436215290356029 | H2AZ2/H4C3/NCAPH2/SMC2 | 4 |
| reactome | B_13_5 | R-HSA-606279 | Deposition of new CENPA-containing nucleosomes at the centromere | 4/41 | 73/11146 | 0.00014277082554685 | 0.00619922217514096 | 0.00436215290356029 | CENPH/CENPM/H2AZ2/H4C3 | 4 |
| reactome | B_13_5 | R-HSA-774815 | Nucleosome assembly | 4/41 | 73/11146 | 0.00014277082554685 | 0.00619922217514096 | 0.00436215290356029 | CENPH/CENPM/H2AZ2/H4C3 | 4 |
| MeSH_gene2pubmed | B_13_5 | D004259 | DNA-Directed DNA Polymerase | 5/49 | 270/26076 | 0.00015071028134947 | 0.00679010916242078 | 0.00545386850288841 | EIF1AX/HMGB1/RFC2/SMC3/TFAM | 5 |