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Selected Module: B_13_5
Module Info
| Module_Name | B_13_5 |
| Cell_Type | B |
| Name | B_13_5: Spliceosomes |
| Meta_Module | B_9 |
| Gene_Number | 49 |
Genes:
ACAT2, ANP32E, ARHGDIA, BCCIP, C8orf33, CBX5, CENPH, CENPM, CKAP2, CKS1B, DNMT1, DYNC2I2, EIF1AX, EIF4A1, H2AZ2, H4C3, HMGB1, HMGN1, HNRNPA2B1, HNRNPD, HNRNPR, HSPH1, KIF20B, LSM7, MCMBP, MYBL2, NCAPH2, POLR3K, PPIH, PTBP1, PTGES3, PUM3, RBM14, RBM8A, RFC2, SAE1, SMC2, SMC3, SNRPD1, SQLE, SRSF2, SSB, TACC3, TFAM, TUBB, TUBB4B, USP1, YWHAQ, ZPR1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| E2F1DP1RB | 2.29169207565885e-09 | CBX5/DNMT1/EIF1AX/EIF4A1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1/SRSF2 |
| E2F4DP1 | 2.29169207565885e-09 | DNMT1/EIF1AX/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F1DP1 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F1DP2 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F4DP2 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F | 1.94556737821906e-08 | ANP32E/CBX5/DNMT1/EIF1AX/HNRNPD/SMC2/SMC3/SRSF2/YWHAQ |
| E2F1 | 2.39174813594465e-07 | CBX5/DNMT1/HNRNPD/SMC2/SMC3/SRSF2/USP1/YWHAQ |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_13_5 | GO:0000922 | spindle pole | 5/48 | 180/19960 | 7.05581513698722e-05 | 0.00117181451682829 | 0.00065209926179515 | BCCIP/CKAP2/KIF20B/SMC3/TACC3 | 5 |
| GO | B_13_5 | GO:0140014 | mitotic nuclear division | 6/48 | 282/18986 | 7.39892469704523e-05 | 0.00398555410347503 | 0.00321918127169687 | BCCIP/KIF20B/MYBL2/NCAPH2/SMC2/SMC3 | 6 |
| GO | B_13_5 | GO:0005819 | spindle | 7/48 | 434/19960 | 7.46378673139037e-05 | 0.00117181451682829 | 0.00065209926179515 | BCCIP/CKAP2/KIF20B/SMC3/TACC3/TUBB/TUBB4B | 7 |
| MeSH_gene2pubmed | B_13_5 | D020541 | Coiled Bodies | 4/49 | 120/26076 | 7.7003525415152e-05 | 0.00427647389579972 | 0.00343489710192103 | LSM7/SNRPD1/SRSF2/ZPR1 | 4 |
| MeSH_gene2pubmed | B_13_5 | D036961 | Matrix Attachment Region Binding Proteins | 4/49 | 121/26076 | 7.95265091600427e-05 | 0.00427647389579972 | 0.00343489710192103 | HNRNPA2B1/HNRNPD/SNRPD1/SRSF2 | 4 |
| MeSH_gene2pubmed | B_13_5 | D029543 | Nucleocytoplasmic Transport Proteins | 5/49 | 243/26076 | 9.20472755658714e-05 | 0.00479508776150961 | 0.00385145179341409 | HNRNPA2B1/HNRNPD/RBM8A/SNRPD1/SRSF2 | 5 |
| GO | B_13_5 | GO:2000278 | regulation of DNA biosynthetic process | 4/48 | 94/18986 | 9.2790884022909e-05 | 0.00450681688055731 | 0.0036402116544366 | HNRNPD/PTGES3/RFC2/USP1 | 4 |
| reactome | B_13_5 | R-HSA-68877 | Mitotic Prometaphase | 6/41 | 205/11146 | 9.45550381825882e-05 | 0.00619922217514096 | 0.00436215290356029 | CENPH/CENPM/SMC2/SMC3/TUBB/TUBB4B | 6 |
| GO | B_13_5 | GO:0051054 | positive regulation of DNA metabolic process | 6/48 | 295/18986 | 9.48216422889533e-05 | 0.00450681688055731 | 0.0036402116544366 | HMGB1/HNRNPA2B1/HNRNPD/PTGES3/RFC2/USP1 | 6 |
| GO | B_13_5 | GO:0097431 | mitotic spindle pole | 3/48 | 39/19960 | 0.00011224079937287 | 0.00160198231832187 | 0.00089148194717207 | BCCIP/KIF20B/SMC3 | 3 |