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Selected Module: B_13_5
Module Info
| Module_Name | B_13_5 |
| Cell_Type | B |
| Name | B_13_5: Spliceosomes |
| Meta_Module | B_9 |
| Gene_Number | 49 |
Genes:
ACAT2, ANP32E, ARHGDIA, BCCIP, C8orf33, CBX5, CENPH, CENPM, CKAP2, CKS1B, DNMT1, DYNC2I2, EIF1AX, EIF4A1, H2AZ2, H4C3, HMGB1, HMGN1, HNRNPA2B1, HNRNPD, HNRNPR, HSPH1, KIF20B, LSM7, MCMBP, MYBL2, NCAPH2, POLR3K, PPIH, PTBP1, PTGES3, PUM3, RBM14, RBM8A, RFC2, SAE1, SMC2, SMC3, SNRPD1, SQLE, SRSF2, SSB, TACC3, TFAM, TUBB, TUBB4B, USP1, YWHAQ, ZPR1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| E2F1DP1RB | 2.29169207565885e-09 | CBX5/DNMT1/EIF1AX/EIF4A1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1/SRSF2 |
| E2F4DP1 | 2.29169207565885e-09 | DNMT1/EIF1AX/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F1DP1 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F1DP2 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F4DP2 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F | 1.94556737821906e-08 | ANP32E/CBX5/DNMT1/EIF1AX/HNRNPD/SMC2/SMC3/SRSF2/YWHAQ |
| E2F1 | 2.39174813594465e-07 | CBX5/DNMT1/HNRNPD/SMC2/SMC3/SRSF2/USP1/YWHAQ |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_13_5 | D017411 | Ribonucleoproteins, Small Nuclear | 7/49 | 492/26076 | 3.53102522154442e-05 | 0.00218008112752391 | 0.00175105812156121 | HNRNPA2B1/HNRNPR/LSM7/RBM8A/SNRPD1/SRSF2/ZPR1 | 7 |
| GO | B_13_5 | GO:0000775 | chromosome, centromeric region | 6/48 | 262/19960 | 3.7337448415854e-05 | 0.00097699656688151 | 0.0005436856523712 | CBX5/CENPH/CENPM/DNMT1/H4C3/SMC3 | 6 |
| MeSH_gene2pubmed | B_13_5 | D012216 | Rheumatic Diseases | 4/49 | 103/26076 | 4.24272883556117e-05 | 0.00252593891745731 | 0.00202885378903527 | HMGB1/HNRNPD/HNRNPR/SNRPD1 | 4 |
| GO | B_13_5 | GO:0033044 | regulation of chromosome organization | 6/48 | 258/18986 | 4.51878846779625e-05 | 0.00304265090164947 | 0.00245758671055585 | HNRNPA2B1/HNRNPD/NCAPH2/PTGES3/SMC2/TACC3 | 6 |
| GO | B_13_5 | GO:1904358 | positive regulation of telomere maintenance via telomere lengthening | 3/48 | 29/18986 | 5.29126713631653e-05 | 0.0032887260354952 | 0.00265634463523583 | HNRNPA2B1/HNRNPD/PTGES3 | 3 |
| WikiPathways | B_13_5 | WP5366 | NF1 copy number variation syndrome | 5/34 | 109/8836 | 5.45143779473093e-05 | 0.00267120451941816 | 0.00226665045149339 | DNMT1/H4C3/RFC2/TUBB/USP1 | 5 |
| GO | B_13_5 | GO:0000781 | chromosome, telomeric region | 5/48 | 173/19960 | 5.84623009232809e-05 | 0.00117181451682829 | 0.00065209926179515 | CBX5/H4C3/HNRNPA2B1/PTGES3/SSB | 5 |
| GO | B_13_5 | GO:1902850 | microtubule cytoskeleton organization involved in mitosis | 5/48 | 167/18986 | 6.25385487692176e-05 | 0.00360936767182342 | 0.00291533084488082 | BCCIP/CENPH/MYBL2/SMC3/TACC3 | 5 |
| MeSH_gene2pubmed | B_13_5 | D018386 | Kinetochores | 5/49 | 224/26076 | 6.27007500183738e-05 | 0.00360421207864238 | 0.00289493118052165 | CBX5/CENPH/CENPM/SMC2/TACC3 | 5 |
| GO | B_13_5 | GO:0045171 | intercellular bridge | 4/48 | 92/19960 | 7.04164385455867e-05 | 0.00117181451682829 | 0.00065209926179515 | KIF20B/NCAPH2/TUBB/TUBB4B | 4 |