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Selected Module: B_13_5
Module Info
| Module_Name | B_13_5 |
| Cell_Type | B |
| Name | B_13_5: Spliceosomes |
| Meta_Module | B_9 |
| Gene_Number | 49 |
Genes:
ACAT2, ANP32E, ARHGDIA, BCCIP, C8orf33, CBX5, CENPH, CENPM, CKAP2, CKS1B, DNMT1, DYNC2I2, EIF1AX, EIF4A1, H2AZ2, H4C3, HMGB1, HMGN1, HNRNPA2B1, HNRNPD, HNRNPR, HSPH1, KIF20B, LSM7, MCMBP, MYBL2, NCAPH2, POLR3K, PPIH, PTBP1, PTGES3, PUM3, RBM14, RBM8A, RFC2, SAE1, SMC2, SMC3, SNRPD1, SQLE, SRSF2, SSB, TACC3, TFAM, TUBB, TUBB4B, USP1, YWHAQ, ZPR1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| E2F1DP1RB | 2.29169207565885e-09 | CBX5/DNMT1/EIF1AX/EIF4A1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1/SRSF2 |
| E2F4DP1 | 2.29169207565885e-09 | DNMT1/EIF1AX/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F1DP1 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F1DP2 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F4DP2 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F | 1.94556737821906e-08 | ANP32E/CBX5/DNMT1/EIF1AX/HNRNPD/SMC2/SMC3/SRSF2/YWHAQ |
| E2F1 | 2.39174813594465e-07 | CBX5/DNMT1/HNRNPD/SMC2/SMC3/SRSF2/USP1/YWHAQ |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_13_5 | D034481 | Heterogeneous-Nuclear Ribonucleoprotein Group A-B | 5/49 | 156/26076 | 1.10804953531538e-05 | 0.00087958027398606 | 0.00070648571875747 | HNRNPA2B1/HNRNPD/HNRNPR/PTBP1/SRSF2 | 5 |
| GO | B_13_5 | GO:0007051 | spindle organization | 6/48 | 204/18986 | 1.20464178884373e-05 | 0.00108150062820637 | 0.00087354141413229 | BCCIP/CENPH/MYBL2/SMC3/TACC3/TUBB | 6 |
| MeSH_gene2pubmed | B_13_5 | D034664 | Heterogeneous-Nuclear Ribonucleoprotein L | 3/49 | 25/26076 | 1.39298623499841e-05 | 0.00105550366079198 | 0.00084778875163539 | HNRNPA2B1/HNRNPD/PTBP1 | 3 |
| reactome | B_13_5 | R-HSA-68886 | M Phase | 9/41 | 417/11146 | 1.59014753825804e-05 | 0.0014629357351974 | 0.00102941130108284 | CENPH/CENPM/H2AZ2/H4C3/NCAPH2/SMC2/SMC3/TUBB/TUBB4B | 9 |
| MeSH_gene2pubmed | B_13_5 | D020365 | RNA Helicases | 7/49 | 447/26076 | 1.9147414767813e-05 | 0.00137266455230478 | 0.0011025348470506 | HNRNPA2B1/HNRNPD/RBM14/RBM8A/SNRPD1/SRSF2/SSB | 7 |
| MeSH_gene2pubmed | B_13_5 | D042581 | Intranuclear Space | 3/49 | 28/26076 | 1.97624170697749e-05 | 0.00137266455230478 | 0.0011025348470506 | RBM8A/SRSF2/ZPR1 | 3 |
| GO | B_13_5 | GO:0007052 | mitotic spindle organization | 5/48 | 134/18986 | 2.18067589070961e-05 | 0.00176198611969336 | 0.00142317794972627 | BCCIP/CENPH/MYBL2/SMC3/TACC3 | 5 |
| MeSH_gene2pubmed | B_13_5 | D017414 | Ribonucleoprotein, U4-U6 Small Nuclear | 4/49 | 89/26076 | 2.38867724283943e-05 | 0.00159276998552533 | 0.00127932524332284 | LSM7/PPIH/SNRPD1/SRSF2 | 4 |
| GO | B_13_5 | GO:0000819 | sister chromatid segregation | 6/48 | 235/18986 | 2.68030838864035e-05 | 0.00196880834365582 | 0.00159023081431294 | BCCIP/MYBL2/NCAPH2/SMC2/SMC3/TACC3 | 6 |
| MeSH_gene2pubmed | B_13_5 | D012331 | RNA, Fungal | 5/49 | 188/26076 | 2.72281574797684e-05 | 0.00174574378918361 | 0.00140219499248038 | CBX5/CENPH/EIF1AX/POLR3K/PTBP1 | 5 |