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Selected Module: B_13_5
Module Info
| Module_Name | B_13_5 |
| Cell_Type | B |
| Name | B_13_5: Spliceosomes |
| Meta_Module | B_9 |
| Gene_Number | 49 |
Genes:
ACAT2, ANP32E, ARHGDIA, BCCIP, C8orf33, CBX5, CENPH, CENPM, CKAP2, CKS1B, DNMT1, DYNC2I2, EIF1AX, EIF4A1, H2AZ2, H4C3, HMGB1, HMGN1, HNRNPA2B1, HNRNPD, HNRNPR, HSPH1, KIF20B, LSM7, MCMBP, MYBL2, NCAPH2, POLR3K, PPIH, PTBP1, PTGES3, PUM3, RBM14, RBM8A, RFC2, SAE1, SMC2, SMC3, SNRPD1, SQLE, SRSF2, SSB, TACC3, TFAM, TUBB, TUBB4B, USP1, YWHAQ, ZPR1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| E2F1DP1RB | 2.29169207565885e-09 | CBX5/DNMT1/EIF1AX/EIF4A1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1/SRSF2 |
| E2F4DP1 | 2.29169207565885e-09 | DNMT1/EIF1AX/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F1DP1 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F1DP2 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F4DP2 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F | 1.94556737821906e-08 | ANP32E/CBX5/DNMT1/EIF1AX/HNRNPD/SMC2/SMC3/SRSF2/YWHAQ |
| E2F1 | 2.39174813594465e-07 | CBX5/DNMT1/HNRNPD/SMC2/SMC3/SRSF2/USP1/YWHAQ |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_13_5 | D000974 | Antibodies, Antinuclear | 7/49 | 200/26076 | 9.19166362896366e-08 | 2.18892903849749e-05 | 1.75816483248749e-05 | CBX5/CENPH/HMGB1/HNRNPA2B1/HNRNPR/SNRPD1/SSB | 7 |
| hallmark | B_13_5 | HALLMARK_G2M_CHECKPOINT | HALLMARK_G2M_CHECKPOINT | 11/33 | 200/4384 | 1.08526205860603e-07 | 5.06455627349479e-07 | 4.18873075251449e-07 | CKS1B/H2AZ2/HNRNPD/KIF20B/MYBL2/RBM14/SMC2/SNRPD1/SQLE/SRSF2/TACC3 | 11 |
| GO | B_13_5 | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | 9/48 | 338/18986 | 1.47001949767231e-07 | 4.37423372649844e-05 | 3.53312260347711e-05 | HNRNPA2B1/HNRNPR/LSM7/PPIH/PTBP1/RBM14/RBM8A/SNRPD1/SRSF2 | 9 |
| GO | B_13_5 | GO:0000398 | mRNA splicing, via spliceosome | 9/48 | 338/18986 | 1.47001949767231e-07 | 4.37423372649844e-05 | 3.53312260347711e-05 | HNRNPA2B1/HNRNPR/LSM7/PPIH/PTBP1/RBM14/RBM8A/SNRPD1/SRSF2 | 9 |
| GO | B_13_5 | GO:0000375 | RNA splicing, via transesterification reactions | 9/48 | 342/18986 | 1.62409668063061e-07 | 4.37423372649844e-05 | 3.53312260347711e-05 | HNRNPA2B1/HNRNPR/LSM7/PPIH/PTBP1/RBM14/RBM8A/SNRPD1/SRSF2 | 9 |
| MeSH_gene2pubmed | B_13_5 | D029702 | Schizosaccharomyces pombe Proteins | 9/49 | 460/26076 | 1.68195684054811e-07 | 3.41275919920235e-05 | 2.74115473834837e-05 | CBX5/CENPH/CKS1B/NCAPH2/PTGES3/RFC2/SAE1/SNRPD1/SRSF2 | 9 |
| MeSH_gene2pubmed | B_13_5 | D053487 | DEAD-box RNA Helicases | 9/49 | 465/26076 | 1.84252146327661e-07 | 3.41275919920235e-05 | 2.74115473834837e-05 | EIF1AX/EIF4A1/HNRNPA2B1/HNRNPD/HSPH1/RBM8A/SNRPD1/SRSF2/SSB | 9 |
| GO | B_13_5 | GO:0072686 | mitotic spindle | 7/48 | 184/19960 | 2.70038821544601e-07 | 3.13241596423853e-05 | 1.74314800557692e-05 | BCCIP/CKAP2/KIF20B/SMC3/TACC3/TUBB/TUBB4B | 7 |
| GO | B_13_5 | GO:0008380 | RNA splicing | 10/48 | 484/18986 | 2.89829212978017e-07 | 5.85455010215594e-05 | 4.72879242227291e-05 | HNRNPA2B1/HNRNPR/LSM7/PPIH/PTBP1/RBM14/RBM8A/SNRPD1/SRSF2/ZPR1 | 10 |
| MeSH_gene2pubmed | B_13_5 | D020090 | Chromosome Segregation | 8/49 | 362/26076 | 3.50610388978452e-07 | 5.84467518427079e-05 | 4.69448857663779e-05 | CENPH/CENPM/CKAP2/KIF20B/SMC2/SMC3/TACC3/TUBB | 8 |