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Selected Module: B_13_5
Module Info
| Module_Name | B_13_5 |
| Cell_Type | B |
| Name | B_13_5: Spliceosomes |
| Meta_Module | B_9 |
| Gene_Number | 49 |
Genes:
ACAT2, ANP32E, ARHGDIA, BCCIP, C8orf33, CBX5, CENPH, CENPM, CKAP2, CKS1B, DNMT1, DYNC2I2, EIF1AX, EIF4A1, H2AZ2, H4C3, HMGB1, HMGN1, HNRNPA2B1, HNRNPD, HNRNPR, HSPH1, KIF20B, LSM7, MCMBP, MYBL2, NCAPH2, POLR3K, PPIH, PTBP1, PTGES3, PUM3, RBM14, RBM8A, RFC2, SAE1, SMC2, SMC3, SNRPD1, SQLE, SRSF2, SSB, TACC3, TFAM, TUBB, TUBB4B, USP1, YWHAQ, ZPR1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| E2F1DP1RB | 2.29169207565885e-09 | CBX5/DNMT1/EIF1AX/EIF4A1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1/SRSF2 |
| E2F4DP1 | 2.29169207565885e-09 | DNMT1/EIF1AX/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F1DP1 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F1DP2 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F4DP2 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F | 1.94556737821906e-08 | ANP32E/CBX5/DNMT1/EIF1AX/HNRNPD/SMC2/SMC3/SRSF2/YWHAQ |
| E2F1 | 2.39174813594465e-07 | CBX5/DNMT1/HNRNPD/SMC2/SMC3/SRSF2/USP1/YWHAQ |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_13_5 | D050704 | E2F4 Transcription Factor | 3/49 | 133/26076 | 0.00201343830481387 | 0.0368835346607112 | 0.0296251419748206 | DNMT1/MYBL2/TFAM | 3 |
| MeSH_gene2pubmed | B_13_5 | D026723 | Polyadenylation | 3/49 | 135/26076 | 0.00210082854917546 | 0.0380660999073424 | 0.0305749875806772 | HNRNPD/PTBP1/SRSF2 | 3 |
| GO | B_13_5 | GO:0033119 | negative regulation of RNA splicing | 2/48 | 27/18986 | 0.00211000505340419 | 0.0355184183989706 | 0.0286886651997939 | HNRNPA2B1/PTBP1 | 2 |
| MeSH_gene2pubmed | B_13_5 | D015694 | Gene Products, rev | 3/49 | 136/26076 | 0.00214539569142506 | 0.0384556410495224 | 0.0308878700565102 | PTBP1/SRSF2/TUBB4B | 3 |
| GO | B_13_5 | GO:0030532 | small nuclear ribonucleoprotein complex | 3/48 | 107/19960 | 0.00217398322097385 | 0.0162531126520426 | 0.00904464197197139 | LSM7/PPIH/SNRPD1 | 3 |
| MeSH_gene2pubmed | B_13_5 | D014529 | Uridine | 3/49 | 138/26076 | 0.00223628757688748 | 0.039658419049696 | 0.0318539507032572 | HNRNPA2B1/HNRNPD/SRSF2 | 3 |
| GO | B_13_5 | GO:1903312 | negative regulation of mRNA metabolic process | 3/48 | 103/18986 | 0.00224642741808143 | 0.0370431296695877 | 0.0299201933235336 | HNRNPA2B1/HNRNPD/PTBP1 | 3 |
| GO | B_13_5 | GO:0005721 | pericentric heterochromatin | 2/48 | 30/19960 | 0.00235976648608763 | 0.0168401517416254 | 0.00937132145192695 | CBX5/DNMT1 | 2 |
| MeSH_gene2pubmed | B_13_5 | D029081 | D029081 | 3/49 | 141/26076 | 0.00237705948225837 | 0.0417111384939442 | 0.0335027109300016 | KIF20B/MYBL2/SMC2 | 3 |
| MeSH_gene2pubmed | B_13_5 | D013698 | Templates, Genetic | 5/49 | 500/26076 | 0.00241894246036167 | 0.0420039279314886 | 0.0337378816839917 | HMGN1/PTGES3/RFC2/SSB/TFAM | 5 |