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Selected Module: B_13_5
Module Info
| Module_Name | B_13_5 |
| Cell_Type | B |
| Name | B_13_5: Spliceosomes |
| Meta_Module | B_9 |
| Gene_Number | 49 |
Genes:
ACAT2, ANP32E, ARHGDIA, BCCIP, C8orf33, CBX5, CENPH, CENPM, CKAP2, CKS1B, DNMT1, DYNC2I2, EIF1AX, EIF4A1, H2AZ2, H4C3, HMGB1, HMGN1, HNRNPA2B1, HNRNPD, HNRNPR, HSPH1, KIF20B, LSM7, MCMBP, MYBL2, NCAPH2, POLR3K, PPIH, PTBP1, PTGES3, PUM3, RBM14, RBM8A, RFC2, SAE1, SMC2, SMC3, SNRPD1, SQLE, SRSF2, SSB, TACC3, TFAM, TUBB, TUBB4B, USP1, YWHAQ, ZPR1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| E2F1DP1RB | 2.29169207565885e-09 | CBX5/DNMT1/EIF1AX/EIF4A1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1/SRSF2 |
| E2F4DP1 | 2.29169207565885e-09 | DNMT1/EIF1AX/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F1DP1 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F1DP2 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F4DP2 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F | 1.94556737821906e-08 | ANP32E/CBX5/DNMT1/EIF1AX/HNRNPD/SMC2/SMC3/SRSF2/YWHAQ |
| E2F1 | 2.39174813594465e-07 | CBX5/DNMT1/HNRNPD/SMC2/SMC3/SRSF2/USP1/YWHAQ |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_13_5 | D051357 | Cyclin-Dependent Kinase 2 | 5/49 | 458/26076 | 0.00165132961306354 | 0.0320172683397461 | 0.0257165190087185 | BCCIP/CBX5/CKS1B/MYBL2/RFC2 | 5 |
| MeSH_gene2pubmed | B_13_5 | D043743 | Ubiquitin-Protein Ligase Complexes | 4/49 | 270/26076 | 0.00165176069419206 | 0.0320172683397461 | 0.0257165190087185 | CKAP2/CKS1B/MYBL2/SMC3 | 4 |
| reactome | B_13_5 | R-HSA-68875 | Mitotic Prophase | 4/41 | 141/11146 | 0.00172839359856228 | 0.0454320603050655 | 0.0319687838531068 | H2AZ2/H4C3/NCAPH2/SMC2 | 4 |
| MeSH_gene2pubmed | B_13_5 | D015977 | Eukaryotic Initiation Factor-1 | 2/49 | 33/26076 | 0.00175973454034651 | 0.0337181319397429 | 0.0270826658840987 | EIF1AX/RBM8A | 2 |
| GO | B_13_5 | GO:0006405 | RNA export from nucleus | 3/48 | 95/18986 | 0.00178321373572516 | 0.0313225369231724 | 0.0252995999118902 | HNRNPA2B1/RBM8A/SSB | 3 |
| MeSH_gene2pubmed | B_13_5 | D019696 | Peptidylprolyl Isomerase | 4/49 | 277/26076 | 0.00181338235201523 | 0.0343512316001068 | 0.0275911764564997 | HNRNPD/KIF20B/PPIH/PTGES3 | 4 |
| MeSH_gene2pubmed | B_13_5 | D008947 | Mixed Connective Tissue Disease | 2/49 | 34/26076 | 0.0018674796246763 | 0.0349785228577011 | 0.0280950216746098 | HNRNPD/SNRPD1 | 2 |
| GO | B_13_5 | GO:0005689 | U12-type spliceosomal complex | 2/48 | 27/19960 | 0.00191285590982503 | 0.0150159188921265 | 0.00835616002713038 | LSM7/SNRPD1 | 2 |
| GO | B_13_5 | GO:0032212 | positive regulation of telomere maintenance via telomerase | 2/48 | 26/18986 | 0.00195685704415811 | 0.0336412870570161 | 0.0271724830319827 | HNRNPD/PTGES3 | 2 |
| MeSH_gene2pubmed | B_13_5 | D047629 | Estrogen Receptor beta | 4/49 | 283/26076 | 0.0019604039943243 | 0.0363110384282068 | 0.0291653085471405 | DNMT1/HMGB1/RBM14/TFAM | 4 |