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Selected Module: B_13_5
Module Info
| Module_Name | B_13_5 |
| Cell_Type | B |
| Name | B_13_5: Spliceosomes |
| Meta_Module | B_9 |
| Gene_Number | 49 |
Genes:
ACAT2, ANP32E, ARHGDIA, BCCIP, C8orf33, CBX5, CENPH, CENPM, CKAP2, CKS1B, DNMT1, DYNC2I2, EIF1AX, EIF4A1, H2AZ2, H4C3, HMGB1, HMGN1, HNRNPA2B1, HNRNPD, HNRNPR, HSPH1, KIF20B, LSM7, MCMBP, MYBL2, NCAPH2, POLR3K, PPIH, PTBP1, PTGES3, PUM3, RBM14, RBM8A, RFC2, SAE1, SMC2, SMC3, SNRPD1, SQLE, SRSF2, SSB, TACC3, TFAM, TUBB, TUBB4B, USP1, YWHAQ, ZPR1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| E2F1DP1RB | 2.29169207565885e-09 | CBX5/DNMT1/EIF1AX/EIF4A1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1/SRSF2 |
| E2F4DP1 | 2.29169207565885e-09 | DNMT1/EIF1AX/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F1DP1 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F1DP2 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F4DP2 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F | 1.94556737821906e-08 | ANP32E/CBX5/DNMT1/EIF1AX/HNRNPD/SMC2/SMC3/SRSF2/YWHAQ |
| E2F1 | 2.39174813594465e-07 | CBX5/DNMT1/HNRNPD/SMC2/SMC3/SRSF2/USP1/YWHAQ |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_13_5 | D035381 | TATA-Binding Protein Associated Factors | 4/49 | 261/26076 | 0.00145907727101997 | 0.0301507615012701 | 0.0242173261955707 | CBX5/HNRNPD/POLR3K/SRSF2 | 4 |
| MeSH_gene2pubmed | B_13_5 | D054321 | rev Gene Products, Human Immunodeficiency Virus | 3/49 | 119/26076 | 0.00146503400216129 | 0.0301507615012701 | 0.0242173261955707 | PTBP1/SRSF2/TUBB4B | 3 |
| GO | B_13_5 | GO:0050686 | negative regulation of mRNA processing | 2/48 | 23/18986 | 0.00153071745981836 | 0.0281095388075735 | 0.0227044216528082 | HNRNPA2B1/PTBP1 | 2 |
| MeSH_gene2pubmed | B_13_5 | D013087 | Spermatids | 4/49 | 265/26076 | 0.00154265715627789 | 0.0308292632488977 | 0.0247623040776674 | DNMT1/HNRNPA2B1/SMC3/TFAM | 4 |
| GO | B_13_5 | GO:0005684 | U2-type spliceosomal complex | 3/48 | 95/19960 | 0.00154691770553559 | 0.0134925599871715 | 0.0075084309683891 | LSM7/RBM8A/SNRPD1 | 3 |
| MeSH_gene2pubmed | B_13_5 | D015367 | Human T-lymphotropic virus 2 | 2/49 | 31/26076 | 0.00155348417091026 | 0.0308292632488977 | 0.0247623040776674 | MYBL2/PTBP1 | 2 |
| MeSH_gene2pubmed | B_13_5 | D038281 | Silent Information Regulator Proteins, Saccharomyces cerevisiae | 2/49 | 31/26076 | 0.00155348417091026 | 0.0308292632488977 | 0.0247623040776674 | DNMT1/TUBB | 2 |
| GO | B_13_5 | GO:0071103 | DNA conformation change | 3/48 | 91/18986 | 0.00157620292481557 | 0.0283015991833551 | 0.0228595511903076 | HMGB1/HNRNPA2B1/RFC2 | 3 |
| GO | B_13_5 | GO:0097525 | spliceosomal snRNP complex | 3/48 | 97/19960 | 0.00164225100285945 | 0.0135701793394176 | 0.00755162511010164 | LSM7/PPIH/SNRPD1 | 3 |
| reactome | B_13_5 | R-HSA-5334118 | DNA methylation | 3/41 | 64/11146 | 0.00164737753833104 | 0.0454320603050655 | 0.0319687838531068 | DNMT1/H2AZ2/H4C3 | 3 |