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Selected Module: B_13_5
Module Info
| Module_Name | B_13_5 |
| Cell_Type | B |
| Name | B_13_5: Spliceosomes |
| Meta_Module | B_9 |
| Gene_Number | 49 |
Genes:
ACAT2, ANP32E, ARHGDIA, BCCIP, C8orf33, CBX5, CENPH, CENPM, CKAP2, CKS1B, DNMT1, DYNC2I2, EIF1AX, EIF4A1, H2AZ2, H4C3, HMGB1, HMGN1, HNRNPA2B1, HNRNPD, HNRNPR, HSPH1, KIF20B, LSM7, MCMBP, MYBL2, NCAPH2, POLR3K, PPIH, PTBP1, PTGES3, PUM3, RBM14, RBM8A, RFC2, SAE1, SMC2, SMC3, SNRPD1, SQLE, SRSF2, SSB, TACC3, TFAM, TUBB, TUBB4B, USP1, YWHAQ, ZPR1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| E2F1DP1RB | 2.29169207565885e-09 | CBX5/DNMT1/EIF1AX/EIF4A1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1/SRSF2 |
| E2F4DP1 | 2.29169207565885e-09 | DNMT1/EIF1AX/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F1DP1 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F1DP2 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F4DP2 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F | 1.94556737821906e-08 | ANP32E/CBX5/DNMT1/EIF1AX/HNRNPD/SMC2/SMC3/SRSF2/YWHAQ |
| E2F1 | 2.39174813594465e-07 | CBX5/DNMT1/HNRNPD/SMC2/SMC3/SRSF2/USP1/YWHAQ |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_13_5 | D019926 | Cyclin B | 5/49 | 428/26076 | 0.0012254728239299 | 0.0273551582979376 | 0.0219718759542681 | CKS1B/HNRNPD/KIF20B/MYBL2/SMC2 | 5 |
| MeSH_gene2pubmed | B_13_5 | D004996 | Ethidium | 3/49 | 112/26076 | 0.00123073597621195 | 0.0273551582979376 | 0.0219718759542681 | EIF1AX/SMC3/TFAM | 3 |
| MeSH_gene2pubmed | B_13_5 | D039221 | mRNA Cleavage and Polyadenylation Factors | 3/49 | 113/26076 | 0.0012626394566192 | 0.027437971584506 | 0.0220383922302855 | HNRNPD/PTBP1/SRSF2 | 3 |
| MeSH_gene2pubmed | B_13_5 | D000330 | Aedes | 2/49 | 28/26076 | 0.00126738081104197 | 0.027437971584506 | 0.0220383922302855 | PTBP1/SSB | 2 |
| GO | B_13_5 | GO:0051383 | kinetochore organization | 2/48 | 21/18986 | 0.00127465769576799 | 0.0257480854545134 | 0.0207970466151619 | CENPH/SMC2 | 2 |
| MeSH_gene2pubmed | B_13_5 | D034881 | Nuclear Lamina | 2/49 | 29/26076 | 0.00135963023621052 | 0.0287286634657878 | 0.0230750859902643 | CKAP2/SRSF2 | 2 |
| MeSH_gene2pubmed | B_13_5 | D004258 | DNA Polymerase III | 3/49 | 116/26076 | 0.00136146635500734 | 0.0287286634657878 | 0.0230750859902643 | RFC2/SMC3/TFAM | 3 |
| GO | B_13_5 | GO:0045814 | negative regulation of gene expression, epigenetic | 4/48 | 192/18986 | 0.00139322248923917 | 0.0266844663607228 | 0.0215533730375822 | CBX5/DNMT1/H2AZ2/HMGB1 | 4 |
| GO | B_13_5 | GO:0048025 | negative regulation of mRNA splicing, via spliceosome | 2/48 | 22/18986 | 0.00139986552528824 | 0.0266844663607228 | 0.0215533730375822 | HNRNPA2B1/PTBP1 | 2 |
| GO | B_13_5 | GO:0032200 | telomere organization | 4/48 | 193/18986 | 0.00142008917513747 | 0.0266844663607228 | 0.0215533730375822 | H4C3/HNRNPA2B1/HNRNPD/PTGES3 | 4 |