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Selected Module: B_13_5
Module Info
| Module_Name | B_13_5 |
| Cell_Type | B |
| Name | B_13_5: Spliceosomes |
| Meta_Module | B_9 |
| Gene_Number | 49 |
Genes:
ACAT2, ANP32E, ARHGDIA, BCCIP, C8orf33, CBX5, CENPH, CENPM, CKAP2, CKS1B, DNMT1, DYNC2I2, EIF1AX, EIF4A1, H2AZ2, H4C3, HMGB1, HMGN1, HNRNPA2B1, HNRNPD, HNRNPR, HSPH1, KIF20B, LSM7, MCMBP, MYBL2, NCAPH2, POLR3K, PPIH, PTBP1, PTGES3, PUM3, RBM14, RBM8A, RFC2, SAE1, SMC2, SMC3, SNRPD1, SQLE, SRSF2, SSB, TACC3, TFAM, TUBB, TUBB4B, USP1, YWHAQ, ZPR1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| E2F1DP1RB | 2.29169207565885e-09 | CBX5/DNMT1/EIF1AX/EIF4A1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1/SRSF2 |
| E2F4DP1 | 2.29169207565885e-09 | DNMT1/EIF1AX/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F1DP1 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F1DP2 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F4DP2 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F | 1.94556737821906e-08 | ANP32E/CBX5/DNMT1/EIF1AX/HNRNPD/SMC2/SMC3/SRSF2/YWHAQ |
| E2F1 | 2.39174813594465e-07 | CBX5/DNMT1/HNRNPD/SMC2/SMC3/SRSF2/USP1/YWHAQ |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_13_5 | D011132 | Polyribosomes | 4/49 | 241/26076 | 0.00108808964711031 | 0.026389215783984 | 0.0211960234125139 | EIF1AX/HNRNPD/PTBP1/SSB | 4 |
| MeSH_gene2pubmed | B_13_5 | D005111 | Extrachromosomal Inheritance | 2/49 | 26/26076 | 0.00109229507444205 | 0.026389215783984 | 0.0211960234125139 | KIF20B/TFAM | 2 |
| MeSH_gene2pubmed | B_13_5 | D000101 | Acetyl-CoA C-Acetyltransferase | 3/49 | 108/26076 | 0.00110823063976927 | 0.026391721092791 | 0.0211980356960377 | ACAT2/H2AZ2/H4C3 | 3 |
| reactome | B_13_5 | R-HSA-195258 | RHO GTPase Effectors | 6/41 | 326/11146 | 0.00113271189486122 | 0.0360295622829365 | 0.0253526096155675 | CENPH/CENPM/H2AZ2/H4C3/TUBB4B/YWHAQ | 6 |
| MeSH_gene2pubmed | B_13_5 | D011387 | Prokaryotic Cells | 3/49 | 109/26076 | 0.00113809717728397 | 0.026721239359611 | 0.0214627073314338 | EIF1AX/SMC2/SMC3 | 3 |
| MeSH_gene2pubmed | B_13_5 | D012859 | Sjogren's Syndrome | 4/49 | 246/26076 | 0.00117375908445449 | 0.0271757832470227 | 0.0218278005179256 | CENPH/HMGB1/SNRPD1/SSB | 4 |
| reactome | B_13_5 | R-HSA-2500257 | Resolution of Sister Chromatid Cohesion | 4/41 | 127/11146 | 0.00117487703096532 | 0.0360295622829365 | 0.0253526096155675 | CENPH/CENPM/SMC3/TUBB4B | 4 |
| WikiPathways | B_13_5 | WP2272 | Pathogenic Escherichia coli infection | 3/34 | 55/8836 | 0.00119128791729504 | 0.0291865539737285 | 0.0247662488069232 | TUBB/TUBB4B/YWHAQ | 3 |
| MeSH_gene2pubmed | B_13_5 | D015053 | Zygote | 3/49 | 111/26076 | 0.0011993465887405 | 0.0273551582979376 | 0.0219718759542681 | EIF1AX/KIF20B/SMC3 | 3 |
| GO | B_13_5 | GO:0032392 | DNA geometric change | 3/48 | 83/18986 | 0.0012090846393392 | 0.025049753553489 | 0.0202329953141782 | HMGB1/HNRNPA2B1/RFC2 | 3 |