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Selected Module: B_13_5
Module Info
| Module_Name | B_13_5 |
| Cell_Type | B |
| Name | B_13_5: Spliceosomes |
| Meta_Module | B_9 |
| Gene_Number | 49 |
Genes:
ACAT2, ANP32E, ARHGDIA, BCCIP, C8orf33, CBX5, CENPH, CENPM, CKAP2, CKS1B, DNMT1, DYNC2I2, EIF1AX, EIF4A1, H2AZ2, H4C3, HMGB1, HMGN1, HNRNPA2B1, HNRNPD, HNRNPR, HSPH1, KIF20B, LSM7, MCMBP, MYBL2, NCAPH2, POLR3K, PPIH, PTBP1, PTGES3, PUM3, RBM14, RBM8A, RFC2, SAE1, SMC2, SMC3, SNRPD1, SQLE, SRSF2, SSB, TACC3, TFAM, TUBB, TUBB4B, USP1, YWHAQ, ZPR1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| E2F1DP1RB | 2.29169207565885e-09 | CBX5/DNMT1/EIF1AX/EIF4A1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1/SRSF2 |
| E2F4DP1 | 2.29169207565885e-09 | DNMT1/EIF1AX/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F1DP1 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F1DP2 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F4DP2 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F | 1.94556737821906e-08 | ANP32E/CBX5/DNMT1/EIF1AX/HNRNPD/SMC2/SMC3/SRSF2/YWHAQ |
| E2F1 | 2.39174813594465e-07 | CBX5/DNMT1/HNRNPD/SMC2/SMC3/SRSF2/USP1/YWHAQ |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_13_5 | D034702 | RNA-Binding Protein FUS | 3/49 | 94/26076 | 0.00074117242188842 | 0.0204922286706642 | 0.0164595174875034 | PTBP1/RBM14/SRSF2 | 3 |
| MeSH_gene2pubmed | B_13_5 | D055551 | HSP27 Heat-Shock Proteins | 4/49 | 218/26076 | 0.00074986559622706 | 0.0204922286706642 | 0.0164595174875034 | HMGB1/HNRNPD/HSPH1/SRSF2 | 4 |
| GO | B_13_5 | GO:0001674 | female germ cell nucleus | 2/48 | 17/19960 | 0.00075261364617247 | 0.00787735616327189 | 0.0043836443952502 | DNMT1/HMGN1 | 2 |
| MeSH_gene2pubmed | B_13_5 | D010448 | Peptide Initiation Factors | 5/49 | 387/26076 | 0.00078254304090617 | 0.0208783574232023 | 0.0167696591054295 | EIF1AX/EIF4A1/HNRNPD/NCAPH2/RBM8A | 5 |
| MeSH_gene2pubmed | B_13_5 | D002247 | Carbon Isotopes | 4/49 | 221/26076 | 0.00078904410177669 | 0.0208783574232023 | 0.0167696591054295 | HMGB1/HNRNPA2B1/HNRNPD/PTBP1 | 4 |
| MeSH_gene2pubmed | B_13_5 | D051839 | NFI Transcription Factors | 4/49 | 224/26076 | 0.0008296496558203 | 0.0216097808789445 | 0.017357144115188 | HNRNPA2B1/HNRNPD/SNRPD1/SRSF2 | 4 |
| MeSH_gene2pubmed | B_13_5 | D011418 | Prophase | 3/49 | 99/26076 | 0.00086157741991752 | 0.0220961470615772 | 0.0177477972167626 | CKAP2/SMC2/SMC3 | 3 |
| GO | B_13_5 | GO:0040029 | epigenetic regulation of gene expression | 5/48 | 295/18986 | 0.00086770202803029 | 0.021021918073995 | 0.0169796628528881 | CBX5/DNMT1/H2AZ2/HMGB1/RBM14 | 5 |
| MeSH_gene2pubmed | B_13_5 | D039642 | Eukaryotic Initiation Factors | 4/49 | 228/26076 | 0.00088605984618855 | 0.0223797236908534 | 0.0179755681714808 | EIF1AX/EIF4A1/HNRNPD/TUBB | 4 |
| GO | B_13_5 | GO:0000380 | alternative mRNA splicing, via spliceosome | 3/48 | 75/18986 | 0.00090124146775061 | 0.021021918073995 | 0.0169796628528881 | PTBP1/RBM8A/SRSF2 | 3 |