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Selected Module: B_13_5
Module Info
| Module_Name | B_13_5 |
| Cell_Type | B |
| Name | B_13_5: Spliceosomes |
| Meta_Module | B_9 |
| Gene_Number | 49 |
Genes:
ACAT2, ANP32E, ARHGDIA, BCCIP, C8orf33, CBX5, CENPH, CENPM, CKAP2, CKS1B, DNMT1, DYNC2I2, EIF1AX, EIF4A1, H2AZ2, H4C3, HMGB1, HMGN1, HNRNPA2B1, HNRNPD, HNRNPR, HSPH1, KIF20B, LSM7, MCMBP, MYBL2, NCAPH2, POLR3K, PPIH, PTBP1, PTGES3, PUM3, RBM14, RBM8A, RFC2, SAE1, SMC2, SMC3, SNRPD1, SQLE, SRSF2, SSB, TACC3, TFAM, TUBB, TUBB4B, USP1, YWHAQ, ZPR1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| E2F1DP1RB | 2.29169207565885e-09 | CBX5/DNMT1/EIF1AX/EIF4A1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1/SRSF2 |
| E2F4DP1 | 2.29169207565885e-09 | DNMT1/EIF1AX/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F1DP1 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F1DP2 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F4DP2 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F | 1.94556737821906e-08 | ANP32E/CBX5/DNMT1/EIF1AX/HNRNPD/SMC2/SMC3/SRSF2/YWHAQ |
| E2F1 | 2.39174813594465e-07 | CBX5/DNMT1/HNRNPD/SMC2/SMC3/SRSF2/USP1/YWHAQ |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_13_5 | D000546 | Amanitins | 3/49 | 81/26076 | 0.00047991138271866 | 0.0150945712262644 | 0.0121240770371031 | CBX5/EIF1AX/SRSF2 | 3 |
| MeSH_gene2pubmed | B_13_5 | D013462 | Sulfur Radioisotopes | 5/49 | 352/26076 | 0.00051033258740177 | 0.0157541559851621 | 0.0126538606466872 | EIF4A1/HNRNPR/SMC3/SSB/TFAM | 5 |
| MeSH_gene2pubmed | B_13_5 | D009134 | Muscular Atrophy, Spinal | 4/49 | 199/26076 | 0.00053302982921024 | 0.0161556495507907 | 0.0129763434020179 | HNRNPR/LSM7/SNRPD1/ZPR1 | 4 |
| MeSH_gene2pubmed | B_13_5 | D012321 | DNA-Directed RNA Polymerases | 4/49 | 205/26076 | 0.00059588422374089 | 0.0177381964460014 | 0.0142474573796696 | POLR3K/SRSF2/SSB/TFAM | 4 |
| reactome | B_13_5 | R-HSA-2990846 | SUMOylation | 5/41 | 189/11146 | 0.00060710644386106 | 0.0223415171340873 | 0.0157208615989287 | CBX5/DNMT1/H4C3/SAE1/SMC3 | 5 |
| MeSH_gene2pubmed | B_13_5 | D034502 | Heterogeneous-Nuclear Ribonucleoprotein D | 3/49 | 88/26076 | 0.00061158009065673 | 0.0177609544477491 | 0.0142657367837192 | DNMT1/HNRNPD/PTBP1 | 3 |
| KEGG | B_13_5 | hsa03040 | Spliceosome | 5/28 | 217/8541 | 0.00061643714935468 | 0.0315929630699575 | 0.0298738098609768 | LSM7/PPIH/RBM8A/SNRPD1/SRSF2 | 5 |
| MeSH_gene2pubmed | B_13_5 | D023081 | CCAAT-Binding Factor | 4/49 | 207/26076 | 0.00061795762325701 | 0.0177609544477491 | 0.0142657367837192 | CKS1B/HMGB1/MYBL2/SQLE | 4 |
| MeSH_gene2pubmed | B_13_5 | D004278 | DNA, Superhelical | 3/49 | 93/26076 | 0.00071846358203423 | 0.0202996405296791 | 0.0163048291944255 | HMGB1/SMC2/TFAM | 3 |
| GO | B_13_5 | GO:0031507 | heterochromatin formation | 4/48 | 161/18986 | 0.00072493410108404 | 0.0195248917891969 | 0.015770496234109 | CBX5/DNMT1/H2AZ2/HMGB1 | 4 |