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Selected Module: B_13_5
Module Info
| Module_Name | B_13_5 |
| Cell_Type | B |
| Name | B_13_5: Spliceosomes |
| Meta_Module | B_9 |
| Gene_Number | 49 |
Genes:
ACAT2, ANP32E, ARHGDIA, BCCIP, C8orf33, CBX5, CENPH, CENPM, CKAP2, CKS1B, DNMT1, DYNC2I2, EIF1AX, EIF4A1, H2AZ2, H4C3, HMGB1, HMGN1, HNRNPA2B1, HNRNPD, HNRNPR, HSPH1, KIF20B, LSM7, MCMBP, MYBL2, NCAPH2, POLR3K, PPIH, PTBP1, PTGES3, PUM3, RBM14, RBM8A, RFC2, SAE1, SMC2, SMC3, SNRPD1, SQLE, SRSF2, SSB, TACC3, TFAM, TUBB, TUBB4B, USP1, YWHAQ, ZPR1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| E2F1DP1RB | 2.29169207565885e-09 | CBX5/DNMT1/EIF1AX/EIF4A1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1/SRSF2 |
| E2F4DP1 | 2.29169207565885e-09 | DNMT1/EIF1AX/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F1DP1 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F1DP2 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F4DP2 | 1.94556737821906e-08 | DNMT1/EIF4A1/H2AZ2/HNRNPA2B1/HNRNPD/HNRNPR/MCMBP/SMC3/SNRPD1 |
| E2F | 1.94556737821906e-08 | ANP32E/CBX5/DNMT1/EIF1AX/HNRNPD/SMC2/SMC3/SRSF2/YWHAQ |
| E2F1 | 2.39174813594465e-07 | CBX5/DNMT1/HNRNPD/SMC2/SMC3/SRSF2/USP1/YWHAQ |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_13_5 | D016325 | HIV Long Terminal Repeat | 6/49 | 474/26076 | 0.0002521130204197 | 0.0100064858342772 | 0.0080372872675153 | H2AZ2/H4C3/HMGB1/PTBP1/RFC2/SNRPD1 | 6 |
| MeSH_gene2pubmed | B_13_5 | D039381 | RNA Cap-Binding Proteins | 3/49 | 66/26076 | 0.00026253440628983 | 0.0101777873322128 | 0.0081748779632966 | LSM7/RBM8A/ZPR1 | 3 |
| GO | B_13_5 | GO:0000956 | nuclear-transcribed mRNA catabolic process | 4/48 | 124/18986 | 0.00027005056529318 | 0.00991822076167704 | 0.00801106940104191 | HNRNPD/LSM7/RBM8A/SSB | 4 |
| GO | B_13_5 | GO:0006457 | protein folding | 5/48 | 231/18986 | 0.00028545790630522 | 0.0100282603606358 | 0.00809994974413002 | ANP32E/HSPH1/PPIH/PTGES3/ZPR1 | 5 |
| MeSH_gene2pubmed | B_13_5 | D051840 | Y-Box-Binding Protein 1 | 4/49 | 171/26076 | 0.00030051741248924 | 0.0113855119686265 | 0.00914493178675398 | HNRNPA2B1/HNRNPD/SNRPD1/SRSF2 | 4 |
| MeSH_gene2pubmed | B_13_5 | D013692 | Telophase | 3/49 | 70/26076 | 0.00031240183306082 | 0.0115538833900678 | 0.0092801690223005 | CBX5/HMGN1/SRSF2 | 3 |
| MeSH_gene2pubmed | B_13_5 | D004270 | DNA, Circular | 4/49 | 174/26076 | 0.00032103817216384 | 0.0115538833900678 | 0.0092801690223005 | DNMT1/RFC2/SMC2/TFAM | 4 |
| MeSH_gene2pubmed | B_13_5 | D000266 | Adenylyl Imidodiphosphate | 3/49 | 71/26076 | 0.00032575436072776 | 0.0115538833900678 | 0.0092801690223005 | EIF4A1/PTGES3/RBM8A | 3 |
| GO | B_13_5 | GO:0075522 | IRES-dependent viral translational initiation | 2/48 | 11/18986 | 0.00033926785205316 | 0.0114220176857898 | 0.0092257047488141 | PTBP1/SSB | 2 |
| MeSH_gene2pubmed | B_13_5 | D035561 | Transcription Factor TFIIA | 3/49 | 72/26076 | 0.00033946961440814 | 0.0117894968170497 | 0.00946941555980627 | CBX5/HMGB1/SSB | 3 |