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Selected Module: B_13_23


Module Info

Module_Name B_13_23
Cell_Type B
Name B_13_23: Endosomal/Vacuolar pathway
Meta_Module B_2
Gene_Number 57

Genes:

B2M, C19orf38, CCDC32, CRTAP, CUTA, DENND10, DNAJC10, DNAJC4, DPH7, GGCX, GINM1, GNG7, GOLGB1, GOLPH3, GPR108, GRK6, H1-10, HLA-B, HLA-C, IFT20, ISCU, KLF10, KLHDC2, MMP24OS, NME3, NPC2, NRBF2, ORMDL3, OXR1, P4HTM, PAOX, PIM1, RAB2A, RARS2, RNASE6, RNF113A, RUSF1, SAT2, SCRN2, SEC62, SELENOF, SERINC3, SF3B5, SH3GLB1, SLC39A4, SLC50A1, SLC66A3, SUPT5H, TARS3, THEMIS2, TMEM30A, TVP23B, UBR2, VMP1, VPS36, YIPF3, ZFPL1


UMAP Visualizations


UMAP for B_13_23

UMAP for B_13_23


Word Cloud

Enriched TF

Wordcloud for B_13_23
No TF enriched


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
KEGG B_13_23 hsa04144 Endocytosis 5/25 252/8541 0.00070345930683678 0.0457248549443911 0.0348027236013989 GRK6/HLA-B/HLA-C/SH3GLB1/VPS36 5
GO B_13_23 GO:0012507 ER to Golgi transport vesicle membrane 3/56 64/19960 0.00077200539234993 0.0208441455934481 0.0152775803959776 B2M/HLA-B/HLA-C 3
reactome B_13_23 R-HSA-9703465 Signaling by FLT3 fusion proteins 2/29 19/11146 0.00108750477097803 0.0436329395907525 0.037268435620372 GOLGB1/PIM1 2
reactome B_13_23 R-HSA-6798695 Neutrophil degranulation 6/29 479/11146 0.00124665541687864 0.0436329395907525 0.037268435620372 B2M/HLA-B/HLA-C/NPC2/ORMDL3/TMEM30A 6
GO B_13_23 GO:0005801 cis-Golgi network 3/56 77/19960 0.00132095948543413 0.0297215884222679 0.0217842441457558 GOLGB1/GPR108/IFT20 3
GO B_13_23 GO:0030670 phagocytic vesicle membrane 3/56 82/19960 0.00158348886319986 0.0305387137902831 0.0223831508482387 B2M/HLA-B/HLA-C 3
reactome B_13_23 R-HSA-1236974 ER-Phagosome pathway 3/29 90/11146 0.0015980849189003 0.0466108101345921 0.0398119400848847 B2M/HLA-B/HLA-C 3
reactome B_13_23 R-HSA-877300 Interferon gamma signaling 3/29 96/11146 0.00192337152461102 0.0480842881152755 0.0410704896984609 B2M/HLA-B/HLA-C 3
reactome B_13_23 R-HSA-9682385 FLT3 signaling in disease 2/29 28/11146 0.00236933525954869 0.0483039142025268 0.0412580801008048 GOLGB1/PIM1 2
GO B_13_23 GO:0031901 early endosome membrane 4/56 200/19960 0.00239183242513273 0.0361815986541802 0.026519066459984 B2M/HLA-B/HLA-C/TMEM30A 4