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Selected Module: B_13_23
Module Info
| Module_Name | B_13_23 |
| Cell_Type | B |
| Name | B_13_23: Endosomal/Vacuolar pathway |
| Meta_Module | B_2 |
| Gene_Number | 57 |
Genes:
B2M, C19orf38, CCDC32, CRTAP, CUTA, DENND10, DNAJC10, DNAJC4, DPH7, GGCX, GINM1, GNG7, GOLGB1, GOLPH3, GPR108, GRK6, H1-10, HLA-B, HLA-C, IFT20, ISCU, KLF10, KLHDC2, MMP24OS, NME3, NPC2, NRBF2, ORMDL3, OXR1, P4HTM, PAOX, PIM1, RAB2A, RARS2, RNASE6, RNF113A, RUSF1, SAT2, SCRN2, SEC62, SELENOF, SERINC3, SF3B5, SH3GLB1, SLC39A4, SLC50A1, SLC66A3, SUPT5H, TARS3, THEMIS2, TMEM30A, TVP23B, UBR2, VMP1, VPS36, YIPF3, ZFPL1
UMAP Visualizations
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Enriched TF
No TF enriched
Functional Enrichment Results
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enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_13_23 | R-HSA-1236977 | Endosomal/Vacuolar pathway | 3/29 | 11/11146 | 2.57679053520704e-06 | 0.00045093834366123 | 0.00038516237473621 | B2M/HLA-B/HLA-C | 3 |
| GO | B_13_23 | GO:0002428 | antigen processing and presentation of peptide antigen via MHC class Ib | 3/52 | 18/18986 | 1.53598106117348e-05 | 0.00909748567418165 | 0.00785661290616873 | B2M/HLA-B/HLA-C | 3 |
| MeSH_gene2pubmed | B_13_23 | D002836 | Hemophilia B | 3/56 | 29/26076 | 3.29478797758813e-05 | 0.0479255532458863 | 0.0400765285008235 | GGCX/HLA-B/HLA-C | 3 |
| GO | B_13_23 | GO:0019885 | antigen processing and presentation of endogenous peptide antigen via MHC class I | 3/52 | 23/18986 | 3.30151011366029e-05 | 0.00909748567418165 | 0.00785661290616873 | B2M/HLA-B/HLA-C | 3 |
| GO | B_13_23 | GO:0002475 | antigen processing and presentation via MHC class Ib | 3/52 | 25/18986 | 4.27112003482706e-05 | 0.00909748567418165 | 0.00785661290616873 | B2M/HLA-B/HLA-C | 3 |
| GO | B_13_23 | GO:0002483 | antigen processing and presentation of endogenous peptide antigen | 3/52 | 25/18986 | 4.27112003482706e-05 | 0.00909748567418165 | 0.00785661290616873 | B2M/HLA-B/HLA-C | 3 |
| GO | B_13_23 | GO:0042611 | MHC protein complex | 3/56 | 25/19960 | 4.60495391111634e-05 | 0.00621668778000706 | 0.00455648071205196 | B2M/HLA-B/HLA-C | 3 |
| MeSH_gene2pubmed | B_13_23 | D011490 | Protein Disulfide Reductase (Glutathione) | 3/56 | 34/26076 | 5.35481041853478e-05 | 0.0479255532458863 | 0.0400765285008235 | B2M/DNAJC10/SELENOF | 3 |
| reactome | B_13_23 | R-HSA-983170 | Antigen Presentation: Folding, assembly and peptide loading of class I MHC | 3/29 | 29/11146 | 5.52945057209671e-05 | 0.00483826925058462 | 0.00413253674335649 | B2M/HLA-B/HLA-C | 3 |
| GO | B_13_23 | GO:0019883 | antigen processing and presentation of endogenous antigen | 3/52 | 32/18986 | 9.08693715273343e-05 | 0.0154841409082578 | 0.0133721454100225 | B2M/HLA-B/HLA-C | 3 |