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Selected Module: B_13_11
Module Info
| Module_Name | B_13_11 |
| Cell_Type | B |
| Name | B_13_11: Ribonucleoprotein, U1 Small Nuclear |
| Meta_Module | B_6 |
| Gene_Number | 57 |
Genes:
AFG3L2, ARPP19, BNIP2, C5orf24, CCNK, CDC5L, CHML, CHORDC1, COPA, CSGALNACT2, DDX3Y, DDX46, DDX52, DHX38, DNAJC21, DNM1L, EDRF1, FAM107B, FBXO7, FOXJ3, GABPB1, HAPSTR1, HIPK1, HNRNPC, HNRNPU, MYEF2, MYSM1, NFX1, NRAS, NUCKS1, OSBPL10, PABPN1, PANK3, PCNX1, PHF20L1, PHRF1, PTPRE, RAD21, RASSF2, RBM12, SEC22C, SMARCA5, SMARCD1, SMARCE1, SPOPL, SRSF4, TARDBP, TAX1BP1, TOB2, TRIP11, TTC7A, WDR82, XIAP, XPC, ZBTB43, ZC3H18, ZNF736
UMAP Visualizations
Word Cloud
Enriched TF
Functional Enrichment Results
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enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_13_11 | D017412 | Ribonucleoprotein, U1 Small Nuclear | 8/56 | 166/26076 | 2.49422598423343e-09 | 3.49939905587951e-06 | 3.30025480229624e-06 | DDX46/DHX38/SMARCA5/SMARCD1/SMARCE1/SRSF4/XIAP/XPC | 8 |
| MeSH_gene2pubmed | B_13_11 | D017381 | Spliceosomes | 8/56 | 422/26076 | 3.17082119056869e-06 | 0.00222433106518394 | 0.00209774854554992 | CDC5L/DDX46/DHX38/HNRNPC/HNRNPU/NFX1/PABPN1/SRSF4 | 8 |
| GO | B_13_11 | GO:0016607 | nuclear speck | 8/55 | 416/19960 | 1.7196357629351e-05 | 0.00232150827996239 | 0.00168343290476805 | CDC5L/DDX46/HIPK1/HNRNPU/PABPN1/SRSF4/TARDBP/ZC3H18 | 8 |
| MeSH_gene2pubmed | B_13_11 | D034481 | Heterogeneous-Nuclear Ribonucleoprotein Group A-B | 5/56 | 156/26076 | 2.14607335816154e-05 | 0.0100364697383355 | 0.00946531302178618 | HNRNPC/PABPN1/TARDBP/TAX1BP1/XIAP | 5 |
| reactome | B_13_11 | R-HSA-72203 | Processing of Capped Intron-Containing Pre-mRNA | 7/36 | 285/11146 | 2.93272422416026e-05 | 0.00526908263074266 | 0.00463549720491767 | CDC5L/DDX46/DHX38/HNRNPC/HNRNPU/PABPN1/SRSF4 | 7 |
| KEGG | B_13_11 | hsa03040 | Spliceosome | 6/26 | 217/8541 | 3.77542968897708e-05 | 0.00392644687653616 | 0.00389465378441846 | CDC5L/DDX46/DHX38/HNRNPC/HNRNPU/SRSF4 | 6 |
| GO | B_13_11 | GO:0000228 | nuclear chromosome | 6/55 | 236/19960 | 4.57969043817522e-05 | 0.0028595766610408 | 0.00207361114601789 | CDC5L/HNRNPU/RAD21/SMARCA5/SMARCE1/TARDBP | 6 |
| reactome | B_13_11 | R-HSA-72163 | mRNA Splicing - Major Pathway | 6/36 | 207/11146 | 4.66851850025839e-05 | 0.00526908263074266 | 0.00463549720491767 | CDC5L/DDX46/DHX38/HNRNPC/HNRNPU/SRSF4 | 6 |
| reactome | B_13_11 | R-HSA-72172 | mRNA Splicing | 6/36 | 215/11146 | 5.76906857380583e-05 | 0.00526908263074266 | 0.00463549720491767 | CDC5L/DDX46/DHX38/HNRNPC/HNRNPU/SRSF4 | 6 |
| GO | B_13_11 | GO:0008380 | RNA splicing | 8/54 | 484/18986 | 6.25291073515418e-05 | 0.0411369994374358 | 0.0356798119481227 | CDC5L/DDX46/DHX38/HNRNPC/HNRNPU/RBM12/SRSF4/TARDBP | 8 |