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Selected Module: B_13_11
Module Info
| Module_Name | B_13_11 |
| Cell_Type | B |
| Name | B_13_11: Ribonucleoprotein, U1 Small Nuclear |
| Meta_Module | B_6 |
| Gene_Number | 57 |
Genes:
AFG3L2, ARPP19, BNIP2, C5orf24, CCNK, CDC5L, CHML, CHORDC1, COPA, CSGALNACT2, DDX3Y, DDX46, DDX52, DHX38, DNAJC21, DNM1L, EDRF1, FAM107B, FBXO7, FOXJ3, GABPB1, HAPSTR1, HIPK1, HNRNPC, HNRNPU, MYEF2, MYSM1, NFX1, NRAS, NUCKS1, OSBPL10, PABPN1, PANK3, PCNX1, PHF20L1, PHRF1, PTPRE, RAD21, RASSF2, RBM12, SEC22C, SMARCA5, SMARCD1, SMARCE1, SPOPL, SRSF4, TARDBP, TAX1BP1, TOB2, TRIP11, TTC7A, WDR82, XIAP, XPC, ZBTB43, ZC3H18, ZNF736
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRPK1 | 0.00059315333416688 | C5orf24/CDC5L/EDRF1/MYEF2/SEC22C/SMARCA5/TARDBP/XPC |
| SMTTTTGT | 0.015620829699592 | DDX3Y/HAPSTR1/HNRNPC/PANK3/RBM12/TARDBP |
| TAXCREB | 0.015620829699592 | BNIP2/PHF20L1/SMARCA5/SMARCD1 |
| MEIS1BHOXA9 | 0.015620829699592 | HIPK1/NRAS/WDR82/ZC3H18 |
| GKCGCNNNNNNNTGAYG | 0.015620829699592 | NFX1/PHF20L1/ZC3H18 |
| GCCATNTTG | 0.015620829699592 | CCNK/HAPSTR1/HNRNPC/RAD21/RBM12/TARDBP |
| ZNF223 | 0.0284387051770875 | DDX46/NUCKS1/PHRF1/SEC22C/SRSF4 |
| RRCCGTTA | 0.0347473828002813 | C5orf24/HNRNPC/SMARCA5 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_13_11 | GO:0036464 | cytoplasmic ribonucleoprotein granule | 4/55 | 258/19960 | 0.00554959495096531 | 0.0366841900131382 | 0.0266014009451997 | DDX3Y/GABPB1/HNRNPU/TARDBP | 4 |
| GO | B_13_11 | GO:0043596 | nuclear replication fork | 2/55 | 41/19960 | 0.00570642955759928 | 0.0366841900131382 | 0.0266014009451997 | CDC5L/SMARCA5 | 2 |
| GO | B_13_11 | GO:0035770 | ribonucleoprotein granule | 4/55 | 277/19960 | 0.00710785428870555 | 0.043616378589784 | 0.0316282511411299 | DDX3Y/GABPB1/HNRNPU/TARDBP | 4 |