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Selected Module: B_13_11
Module Info
| Module_Name | B_13_11 |
| Cell_Type | B |
| Name | B_13_11: Ribonucleoprotein, U1 Small Nuclear |
| Meta_Module | B_6 |
| Gene_Number | 57 |
Genes:
AFG3L2, ARPP19, BNIP2, C5orf24, CCNK, CDC5L, CHML, CHORDC1, COPA, CSGALNACT2, DDX3Y, DDX46, DDX52, DHX38, DNAJC21, DNM1L, EDRF1, FAM107B, FBXO7, FOXJ3, GABPB1, HAPSTR1, HIPK1, HNRNPC, HNRNPU, MYEF2, MYSM1, NFX1, NRAS, NUCKS1, OSBPL10, PABPN1, PANK3, PCNX1, PHF20L1, PHRF1, PTPRE, RAD21, RASSF2, RBM12, SEC22C, SMARCA5, SMARCD1, SMARCE1, SPOPL, SRSF4, TARDBP, TAX1BP1, TOB2, TRIP11, TTC7A, WDR82, XIAP, XPC, ZBTB43, ZC3H18, ZNF736
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRPK1 | 0.00059315333416688 | C5orf24/CDC5L/EDRF1/MYEF2/SEC22C/SMARCA5/TARDBP/XPC |
| SMTTTTGT | 0.015620829699592 | DDX3Y/HAPSTR1/HNRNPC/PANK3/RBM12/TARDBP |
| TAXCREB | 0.015620829699592 | BNIP2/PHF20L1/SMARCA5/SMARCD1 |
| MEIS1BHOXA9 | 0.015620829699592 | HIPK1/NRAS/WDR82/ZC3H18 |
| GKCGCNNNNNNNTGAYG | 0.015620829699592 | NFX1/PHF20L1/ZC3H18 |
| GCCATNTTG | 0.015620829699592 | CCNK/HAPSTR1/HNRNPC/RAD21/RBM12/TARDBP |
| ZNF223 | 0.0284387051770875 | DDX46/NUCKS1/PHRF1/SEC22C/SRSF4 |
| RRCCGTTA | 0.0347473828002813 | C5orf24/HNRNPC/SMARCA5 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_13_11 | GO:0000779 | condensed chromosome, centromeric region | 4/55 | 185/19960 | 0.00168510255431746 | 0.0142180528020536 | 0.0103101669441792 | HNRNPU/RASSF2/SMARCD1/SMARCE1 | 4 |
| GO | B_13_11 | GO:0070034 | telomerase RNA binding | 2/55 | 22/18737 | 0.00188202573911786 | 0.0376405147823571 | 0.0307067357435019 | HNRNPC/HNRNPU | 2 |
| GO | B_13_11 | GO:0003727 | single-stranded RNA binding | 3/55 | 87/18737 | 0.00213096085324403 | 0.0378837485021161 | 0.0309051632517263 | HNRNPC/HNRNPU/PABPN1 | 3 |
| GO | B_13_11 | GO:0070603 | SWI/SNF superfamily-type complex | 3/55 | 94/19960 | 0.00222269321259049 | 0.0176507990411598 | 0.0127994098310165 | SMARCA5/SMARCD1/SMARCE1 | 3 |
| GO | B_13_11 | GO:0008143 | poly(A) binding | 2/55 | 26/18737 | 0.00262803745661783 | 0.0420485993058853 | 0.0343028046969065 | HNRNPU/PABPN1 | 2 |
| GO | B_13_11 | GO:0016514 | SWI/SNF complex | 2/55 | 30/19960 | 0.00308640494190957 | 0.0231480370643218 | 0.0167857110875784 | SMARCD1/SMARCE1 | 2 |
| GO | B_13_11 | GO:0106222 | lncRNA binding | 2/55 | 29/18737 | 0.00326457685797631 | 0.0465493273641086 | 0.0379744512707202 | HNRNPU/RAD21 | 2 |
| GO | B_13_11 | GO:0008187 | poly-pyrimidine tract binding | 2/55 | 30/18737 | 0.00349119955230814 | 0.0465493273641086 | 0.0379744512707202 | HNRNPC/HNRNPU | 2 |
| GO | B_13_11 | GO:0070717 | poly-purine tract binding | 2/55 | 32/18737 | 0.00396585369820616 | 0.048810507054845 | 0.0398190978605315 | HNRNPU/PABPN1 | 2 |
| GO | B_13_11 | GO:1904949 | ATPase complex | 3/55 | 126/19960 | 0.00507309251277783 | 0.0360456573276319 | 0.0261383713954758 | SMARCA5/SMARCD1/SMARCE1 | 3 |