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Selected Module: B_13_11
Module Info
| Module_Name | B_13_11 |
| Cell_Type | B |
| Name | B_13_11: Ribonucleoprotein, U1 Small Nuclear |
| Meta_Module | B_6 |
| Gene_Number | 57 |
Genes:
AFG3L2, ARPP19, BNIP2, C5orf24, CCNK, CDC5L, CHML, CHORDC1, COPA, CSGALNACT2, DDX3Y, DDX46, DDX52, DHX38, DNAJC21, DNM1L, EDRF1, FAM107B, FBXO7, FOXJ3, GABPB1, HAPSTR1, HIPK1, HNRNPC, HNRNPU, MYEF2, MYSM1, NFX1, NRAS, NUCKS1, OSBPL10, PABPN1, PANK3, PCNX1, PHF20L1, PHRF1, PTPRE, RAD21, RASSF2, RBM12, SEC22C, SMARCA5, SMARCD1, SMARCE1, SPOPL, SRSF4, TARDBP, TAX1BP1, TOB2, TRIP11, TTC7A, WDR82, XIAP, XPC, ZBTB43, ZC3H18, ZNF736
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRPK1 | 0.00059315333416688 | C5orf24/CDC5L/EDRF1/MYEF2/SEC22C/SMARCA5/TARDBP/XPC |
| SMTTTTGT | 0.015620829699592 | DDX3Y/HAPSTR1/HNRNPC/PANK3/RBM12/TARDBP |
| TAXCREB | 0.015620829699592 | BNIP2/PHF20L1/SMARCA5/SMARCD1 |
| MEIS1BHOXA9 | 0.015620829699592 | HIPK1/NRAS/WDR82/ZC3H18 |
| GKCGCNNNNNNNTGAYG | 0.015620829699592 | NFX1/PHF20L1/ZC3H18 |
| GCCATNTTG | 0.015620829699592 | CCNK/HAPSTR1/HNRNPC/RAD21/RBM12/TARDBP |
| ZNF223 | 0.0284387051770875 | DDX46/NUCKS1/PHRF1/SEC22C/SRSF4 |
| RRCCGTTA | 0.0347473828002813 | C5orf24/HNRNPC/SMARCA5 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_13_11 | GO:0035060 | brahma complex | 2/55 | 14/19960 | 0.00066416091099153 | 0.00896617229838566 | 0.00650178576023288 | SMARCD1/SMARCE1 | 2 |
| GO | B_13_11 | GO:0071564 | npBAF complex | 2/55 | 14/19960 | 0.00066416091099153 | 0.00896617229838566 | 0.00650178576023288 | SMARCD1/SMARCE1 | 2 |
| GO | B_13_11 | GO:0070063 | RNA polymerase binding | 3/55 | 59/18737 | 0.00069256330191038 | 0.0221620256611323 | 0.0180795472498711 | HNRNPU/PABPN1/PHRF1 | 3 |
| GO | B_13_11 | GO:0016586 | RSC-type complex | 2/55 | 15/19960 | 0.00076498580539575 | 0.00910635518871614 | 0.00660343885029709 | SMARCD1/SMARCE1 | 2 |
| GO | B_13_11 | GO:0071565 | nBAF complex | 2/55 | 16/19960 | 0.00087272541787411 | 0.00910635518871614 | 0.00660343885029709 | SMARCD1/SMARCE1 | 2 |
| GO | B_13_11 | GO:0034399 | nuclear periphery | 4/55 | 155/19960 | 0.00087690827743192 | 0.00910635518871614 | 0.00660343885029709 | HNRNPU/RAD21/SMARCD1/SMARCE1 | 4 |
| GO | B_13_11 | GO:0000776 | kinetochore | 4/55 | 173/19960 | 0.00131737615720061 | 0.0127032700872916 | 0.00921172801651553 | HNRNPU/RASSF2/SMARCD1/SMARCE1 | 4 |
| GO | B_13_11 | GO:0031491 | nucleosome binding | 3/55 | 74/18737 | 0.00133875452626307 | 0.0312962606251084 | 0.025531159983641 | HNRNPC/SMARCA5/SMARCE1 | 3 |
| GO | B_13_11 | GO:0016887 | ATP hydrolysis activity | 6/55 | 418/18737 | 0.00136921140234849 | 0.0312962606251084 | 0.025531159983641 | AFG3L2/DDX3Y/DDX46/DDX52/DHX38/SMARCA5 | 6 |
| GO | B_13_11 | GO:0005697 | telomerase holoenzyme complex | 2/55 | 22/19960 | 0.00166228379603368 | 0.0142180528020536 | 0.0103101669441792 | HNRNPC/HNRNPU | 2 |