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Selected Module: B_13_10


Module Info

Module_Name B_13_10
Cell_Type B
Name B_13_10: Intercellular Junctions
Meta_Module B_6
Gene_Number 74

Genes:

AGFG1, ANGEL2, ASAP1, ATR, BLTP3B, CDK11B, CERT1, CLSTN1, CMIP, CUL2, DOCK2, EEA1, EFR3A, EPS15, ERCC6L2, EXOC1, FNBP1, FXR1, G2E3, GABPB2, GALNT10, GGA2, GNB1, GSK3B, HTT, IPO7, KDM6A, KIAA0586, LRPPRC, MAP4, MARK2, MED17, MLH3, MPRIP, MYO9B, NCBP3, PDS5A, PHF6, PI4KA, PIP4K2A, PPIP5K2, PPP1R12A, PTEN, PTPN11, PTPN2, PTPRA, RBM19, RO60, ROCK2, RPS6KA3, SEPTIN7, SH3KBP1, SLC25A32, SMARCC1, SNRK, SOS2, STX17, TBL1XR1, TENT4B, TGOLN2, TMOD3, TNK2, TPR, UBR4, UBXN2A, VEZT, WDR20, WNK1, XIST, ZBTB40, ZC3H8, ZDHHC17, ZMYM4, ZMYND11


UMAP Visualizations


UMAP for B_13_10

UMAP for B_13_10


Word Cloud

Enriched TF

Wordcloud for B_13_10
TF p.adjust Genes
ETF 0.00814695694547425 CLSTN1/CUL2/GNB1/RO60/UBR4
NFMUE1 0.0104026073134015 CERT1/CLSTN1/GABPB2/KDM6A/RBM19/SEPTIN7
RRAGTTGT 0.0104026073134015 CERT1/EPS15/IPO7/KDM6A/RPS6KA3/TMOD3
RRCCGTTA 0.0110610281088081 FXR1/KIAA0586/UBR4/ZMYM4
E2F 0.0117162801242734 CLSTN1/GNB1/PIP4K2A/TPR/ZMYM4
E4BP4 0.0263722148756448 CLSTN1/FNBP1/KDM6A/MAP4/RPS6KA3
NPM1 0.0288762278591829 ERCC6L2/NCBP3/PPP1R12A/RO60/SEPTIN7/TGOLN2
ZIC2 0.0341299648703405 FNBP1/KDM6A/MAP4/PHF6/ZMYND11


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
GO B_13_10 GO:0006406 mRNA export from nucleus 4/71 74/18986 0.00016955631650428 0.0124129353374179 0.0101808156708056 AGFG1/NCBP3/TPR/WNK1 4
MeSH_gene2pubmed B_13_10 D021601 trans-Golgi Network 6/74 290/26076 0.0001765599832737 0.0126259171017644 0.00998858942327845 CERT1/EPS15/GGA2/GNB1/PI4KA/TGOLN2 6
MeSH_gene2pubmed B_13_10 D008670 Metals 7/74 418/26076 0.00018477035766768 0.0129377744191891 0.0102353053392229 ATR/DOCK2/FNBP1/MAP4/PPP1R12A/SH3KBP1/SMARCC1 7
MeSH_gene2pubmed B_13_10 D019859 Proto-Oncogene Proteins c-met 6/74 297/26076 0.00020082045497699 0.0137217285035462 0.010855505472982 ATR/CUL2/PTEN/PTPN11/SH3KBP1/TPR 6
GO B_13_10 GO:0007163 establishment or maintenance of cell polarity 6/71 227/18986 0.00020482889594327 0.014395374806893 0.0118067687808984 DOCK2/GSK3B/HTT/MAP4/MARK2/ROCK2 6
MeSH_gene2pubmed B_13_10 D000205 D000205 4/74 102/26076 0.00020576740597921 0.0137217285035462 0.010855505472982 MYO9B/PPP1R12A/PTEN/ROCK2 4
MeSH_gene2pubmed B_13_10 D012492 Salts 6/74 299/26076 0.00020821426768249 0.0137217285035462 0.010855505472982 DOCK2/FNBP1/MAP4/PPP1R12A/SH3KBP1/SMARCC1 6
GO B_13_10 GO:0006470 protein dephosphorylation 5/71 146/18986 0.0002173657715653 0.0146889100246249 0.0120475198895914 PPP1R12A/PTEN/PTPN11/PTPN2/PTPRA 5
MeSH_gene2pubmed B_13_10 D015682 Retroviridae Proteins, Oncogenic 6/74 307/26076 0.0002399669247792 0.0155101698881325 0.0122703735221105 EPS15/PTEN/PTPN11/SH3KBP1/TNK2/TPR 6
MeSH_gene2pubmed B_13_10 D051377 Actin-Related Protein 2 4/74 107/26076 0.00024722436148505 0.015677756206628 0.0124029540637788 EPS15/SH3KBP1/TGOLN2/TMOD3 4