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Selected Module: B_12_7
Module Info
| Module_Name | B_12_7 |
| Cell_Type | B |
| Name | B_12_7: RNA splicing |
| Meta_Module | B_6 |
| Gene_Number | 42 |
Genes:
AMD1, ATG12, ATP2B1, BAG5, BTG3, CCDC59, CCNT1, CLK1, CYLD, DNAJA1, DNTTIP2, DUSP10, DYNLL2, EIF5, FAM76B, G3BP2, GOLGA8B, HMGCS1, HNRNPH3, IDI1, ILF3, IVNS1ABP, MYLIP, NAF1, NECAP1, NFKBIZ, POLR2A, PPP1R15B, PTP4A1, RBMX, RIOK1, RSRC2, SLC25A36, SMNDC1, SRSF10, TMEM167B, TOPORS, TRA2B, TSPYL2, USP36, WDR45B, ZNF394
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| GCCATNTTG | 5.25192383417989e-06 | EIF5/HNRNPH3/ILF3/POLR2A/PPP1R15B/RBMX/RSRC2/TRA2B/TSPYL2 |
| NFMUE1 | 0.0043345724876704 | CLK1/EIF5/HNRNPH3/PPP1R15B/TRA2B |
| YY1 | 0.0043345724876704 | EIF5/HNRNPH3/POLR2A/PPP1R15B/TRA2B |
| HSF1 | 0.00510214321937256 | CYLD/DNAJA1/EIF5/NECAP1/RSRC2 |
| CREB3L2 | 0.00556491330840417 | CCDC59/HMGCS1/RIOK1/ZNF394 |
| PSMB5 | 0.00587931630723289 | DNAJA1/NFKBIZ/POLR2A/PPP1R15B/RBMX |
| SRPK1 | 0.00992879942092058 | CCNT1/DNTTIP2/EIF5/HNRNPH3/SRSF10 |
| SMTTTTGT | 0.00992879942092058 | CLK1/ILF3/PTP4A1/RBMX/TRA2B |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_12_7 | GO:0000422 | autophagy of mitochondrion | 3/39 | 115/18986 | 0.00168781639937346 | 0.0391573404654642 | 0.0302622519326258 | ATG12/USP36/WDR45B | 3 |
| KEGG | B_12_7 | hsa03040 | Spliceosome | 4/21 | 217/8541 | 0.00172652227568019 | 0.0362569677892839 | 0.0354391414481723 | RBMX/SMNDC1/SRSF10/TRA2B | 4 |
| GO | B_12_7 | GO:0045582 | positive regulation of T cell differentiation | 3/39 | 122/18986 | 0.00199834799964357 | 0.0448661357339331 | 0.0346742216576524 | CYLD/DUSP10/NFKBIZ | 3 |
| WikiPathways | B_12_7 | WP5333 | Enterocyte cholesterol metabolism | 2/22 | 36/8836 | 0.00354205742008913 | 0.0234661304080905 | 0.0163121065398842 | HMGCS1/IDI1 | 2 |
| hallmark | B_12_7 | HALLMARK_UV_RESPONSE_UP | HALLMARK_UV_RESPONSE_UP | 4/19 | 158/4384 | 0.00412133182122048 | 0.043273984122815 | 0.0368750741898674 | AMD1/BTG3/DNAJA1/EIF5 | 4 |
| WikiPathways | B_12_7 | WP410 | Exercise induced circadian regulation | 2/22 | 48/8836 | 0.00622852835885734 | 0.0366791114466043 | 0.0254968997146207 | DNAJA1/IDI1 | 2 |