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Selected Module: B_12_6


Module Info

Module_Name B_12_6
Cell_Type B
Name B_12_6: RNA polymerase II-specific DNA-binding transcription factor binding
Meta_Module B_6
Gene_Number 31

Genes:

AKAP8, ARL6IP1, BIRC2, C11orf58, CHD4, CSDE1, CTNNB1, DBF4, DDX24, DHX9, EZR, FUBP1, GTPBP4, MALAT1, MED13, MEF2D, NUP54, OTUD4, PPP2R3C, PRPF40A, RAB22A, SLC25A33, SPPL2A, TAB2, TAMALIN, TCERG1, TP53BP2, UBQLN1, USP16, ZBTB21, ZNF326


UMAP Visualizations


UMAP for B_12_6

UMAP for B_12_6


Word Cloud

Enriched TF

Wordcloud for B_12_6
TF p.adjust Genes
CCAWNWWNNNGGC 0.00075078075391258 CSDE1/MED13/RAB22A/ZNF326
AAGWWRNYGGC 0.0494759839291753 CHD4/RAB22A/ZNF326


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
GO B_12_6 GO:0031593 polyubiquitin modification-dependent protein binding 2/31 58/18737 0.0041336230165678 0.0258401445724203 0.0146462357900358 TAB2/UBQLN1 2
GO B_12_6 GO:0061980 regulatory RNA binding 2/31 58/18737 0.0041336230165678 0.0258401445724203 0.0146462357900358 DHX9/MALAT1 2
GO B_12_6 GO:0001098 basal transcription machinery binding 2/31 60/18737 0.00441711873032826 0.0258401445724203 0.0146462357900358 DHX9/ZNF326 2
GO B_12_6 GO:0001099 basal RNA polymerase II transcription machinery binding 2/31 60/18737 0.00441711873032826 0.0258401445724203 0.0146462357900358 DHX9/ZNF326 2
GO B_12_6 GO:0003724 RNA helicase activity 2/31 77/18737 0.00717567971427443 0.039978786979529 0.0226600412029719 DDX24/DHX9 2
GO B_12_6 GO:0008186 ATP-dependent activity, acting on RNA 2/31 79/18737 0.007540320201032 0.0401007937963975 0.0227291948643548 DDX24/DHX9 2