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Selected Module: B_12_6
Module Info
| Module_Name | B_12_6 |
| Cell_Type | B |
| Name | B_12_6: RNA polymerase II-specific DNA-binding transcription factor binding |
| Meta_Module | B_6 |
| Gene_Number | 31 |
Genes:
AKAP8, ARL6IP1, BIRC2, C11orf58, CHD4, CSDE1, CTNNB1, DBF4, DDX24, DHX9, EZR, FUBP1, GTPBP4, MALAT1, MED13, MEF2D, NUP54, OTUD4, PPP2R3C, PRPF40A, RAB22A, SLC25A33, SPPL2A, TAB2, TAMALIN, TCERG1, TP53BP2, UBQLN1, USP16, ZBTB21, ZNF326
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| CCAWNWWNNNGGC | 0.00075078075391258 | CSDE1/MED13/RAB22A/ZNF326 |
| AAGWWRNYGGC | 0.0494759839291753 | CHD4/RAB22A/ZNF326 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_12_6 | D006816 | Huntington Disease | 5/31 | 357/26076 | 5.9295437824704e-05 | 0.0205557517792307 | 0.0163114467559888 | BIRC2/CTNNB1/PRPF40A/TCERG1/UBQLN1 | 5 |
| reactome | B_12_6 | R-HSA-75893 | TNF signaling | 3/17 | 57/11146 | 8.19559081653585e-05 | 0.0198333297760168 | 0.0131992146834735 | BIRC2/SPPL2A/TAB2 | 3 |
| MeSH_gene2pubmed | B_12_6 | D020168 | ATP Binding Cassette Transporter, Subfamily B, Member 1 | 5/31 | 411/26076 | 0.0001150650661942 | 0.0341907625262778 | 0.0271311313973703 | BIRC2/CTNNB1/DHX9/EZR/TP53BP2 | 5 |
| GO | B_12_6 | GO:0070063 | RNA polymerase binding | 3/31 | 59/18737 | 0.0001251990258487 | 0.00366207150607474 | 0.00207566806012333 | DHX9/TCERG1/ZNF326 | 3 |
| GO | B_12_6 | GO:0070934 | CRD-mediated mRNA stabilization | 2/31 | 11/18986 | 0.00014061134418266 | 0.0438682372741693 | 0.0326034222119566 | CSDE1/DHX9 | 2 |
| MeSH_gene2pubmed | B_12_6 | D018761 | Multiple Endocrine Neoplasia Type 1 | 3/31 | 87/26076 | 0.00015070494441531 | 0.0391832855479824 | 0.0310928095846338 | CTNNB1/DBF4/MALAT1 | 3 |
| GO | B_12_6 | GO:1900152 | negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | 2/31 | 12/18986 | 0.00016856191075569 | 0.0438682372741693 | 0.0326034222119566 | CSDE1/DHX9 | 2 |
| MeSH_gene2pubmed | B_12_6 | D020170 | Caspase 1 | 4/31 | 241/26076 | 0.00018403159164447 | 0.0425317456245017 | 0.0337498872162037 | BIRC2/CTNNB1/DBF4/TP53BP2 | 4 |
| GO | B_12_6 | GO:0043021 | ribonucleoprotein complex binding | 4/31 | 174/18737 | 0.00018584111733334 | 0.00434868214560033 | 0.00246484008252651 | CSDE1/DHX9/GTPBP4/USP16 | 4 |
| GO | B_12_6 | GO:2000288 | positive regulation of myoblast proliferation | 2/31 | 14/18986 | 0.00023193842253927 | 0.0482895795726775 | 0.035889419066604 | CTNNB1/MALAT1 | 2 |