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Selected Module: B_12_6


Module Info

Module_Name B_12_6
Cell_Type B
Name B_12_6: RNA polymerase II-specific DNA-binding transcription factor binding
Meta_Module B_6
Gene_Number 31

Genes:

AKAP8, ARL6IP1, BIRC2, C11orf58, CHD4, CSDE1, CTNNB1, DBF4, DDX24, DHX9, EZR, FUBP1, GTPBP4, MALAT1, MED13, MEF2D, NUP54, OTUD4, PPP2R3C, PRPF40A, RAB22A, SLC25A33, SPPL2A, TAB2, TAMALIN, TCERG1, TP53BP2, UBQLN1, USP16, ZBTB21, ZNF326


UMAP Visualizations


UMAP for B_12_6

UMAP for B_12_6


Word Cloud

Enriched TF

Wordcloud for B_12_6
TF p.adjust Genes
CCAWNWWNNNGGC 0.00075078075391258 CSDE1/MED13/RAB22A/ZNF326
AAGWWRNYGGC 0.0494759839291753 CHD4/RAB22A/ZNF326


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
GO B_12_6 GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding 8/31 349/18737 7.25896527099979e-08 8.49298936706976e-06 4.81384012708407e-06 AKAP8/CHD4/CTNNB1/DHX9/MED13/MEF2D/TCERG1/TP53BP2 8
GO B_12_6 GO:0140297 DNA-binding transcription factor binding 8/31 488/18737 9.30731887683393e-07 5.44478154294785e-05 3.08611099600283e-05 AKAP8/CHD4/CTNNB1/DHX9/MED13/MEF2D/TCERG1/TP53BP2 8
MeSH_gene2pubmed B_12_6 D025581 Neurofibromin 2 4/31 97/26076 5.24067454679942e-06 0.0109006030573428 0.00864987125198051 BIRC2/CTNNB1/EZR/GTPBP4 4
GO B_12_6 GO:0003713 transcription coactivator activity 6/31 285/18737 6.28243301597239e-06 0.00024501488762292 0.00013887483508991 BIRC2/CTNNB1/DHX9/MED13/TCERG1/USP16 6
MeSH_gene2pubmed B_12_6 D053763 Presenilins 3/31 36/26076 1.05770033343689e-05 0.0110000834677436 0.00872881117278441 CTNNB1/TAB2/UBQLN1 3
GO B_12_6 GO:1903320 regulation of protein modification by small protein conjugation or removal 5/31 248/18986 4.70131052811034e-05 0.0269058849013019 0.0199967899311966 BIRC2/CTNNB1/GTPBP4/OTUD4/UBQLN1 5
MeSH_gene2pubmed B_12_6 D011839 Radiation, Ionizing 5/31 346/26076 5.11273782172686e-05 0.0205557517792307 0.0163114467559888 BIRC2/CSDE1/CTNNB1/DBF4/PRPF40A 5
GO B_12_6 GO:1901873 regulation of post-translational protein modification 5/31 253/18986 5.16923821350661e-05 0.0269058849013019 0.0199967899311966 BIRC2/CTNNB1/GTPBP4/OTUD4/UBQLN1 5
MeSH_gene2pubmed B_12_6 D025821 D025821 4/31 174/26076 5.23489812063254e-05 0.0205557517792307 0.0163114467559888 BIRC2/CTNNB1/TAB2/UBQLN1 4
MeSH_gene2pubmed B_12_6 D025841 Small Ubiquitin-Related Modifier Proteins 5/31 356/26076 5.85137353627407e-05 0.0205557517792307 0.0163114467559888 CHD4/CTNNB1/MEF2D/TAB2/TP53BP2 5