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Selected Module: B_12_15


Module Info

Module_Name B_12_15
Cell_Type B
Name B_12_15: response to virus
Meta_Module B_20
Gene_Number 30

Genes:

CHMP5, DDX60, DDX60L, DTX3L, EIF2AK2, EPSTI1, HERC5, IFI44, IFI44L, IFIT2, IFIT3, IFITM1, IRF7, IRF9, ISG15, LY6E, MX1, MX2, NMI, OAS1, OAS2, OAS3, PARP9, PLSCR1, SAMD9L, STAT1, TNFSF10, TRIM22, UBE2L6, XAF1


UMAP Visualizations


UMAP for B_12_15

UMAP for B_12_15


Word Cloud

Enriched TF

Wordcloud for B_12_15
TF p.adjust Genes
ISRE 4.33682855335823e-12 DDX60/DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/IRF9/ISG15/PARP9/XAF1
STTTCRNTTT 6.57893968504148e-10 DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/ISG15/PARP9/XAF1
IRF 2.97425446129766e-09 DDX60/DTX3L/IFI44/IFIT2/IRF9/ISG15/PARP9/UBE2L6
IRF7 1.3940631900746e-07 DDX60/DTX3L/EPSTI1/IFIT2/ISG15/PARP9/XAF1
ICSBP 8.0670788913588e-05 DTX3L/IFI44/IFIT3/ISG15/PARP9
IRF1 8.0670788913588e-05 DTX3L/IRF9/ISG15/PARP9/XAF1
IRF2 0.0036613358814046 DTX3L/PARP9/XAF1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
GO B_12_15 GO:0032728 positive regulation of interferon-beta production 5/28 41/18986 3.45637073695466e-09 9.36362254193171e-08 5.77164300094343e-08 IRF7/ISG15/OAS1/OAS2/OAS3 5
MeSH_gene2pubmed B_12_15 D050826 Suppressor of Cytokine Signaling Proteins 8/30 352/26076 4.60108446019164e-09 3.31853216691322e-07 2.15373131146471e-07 EIF2AK2/IRF7/IRF9/ISG15/MX1/OAS1/STAT1/TNFSF10 8
KEGG B_12_15 hsa05168 Herpes simplex virus 1 infection 7/15 182/8541 9.90769508260528e-09 7.76102781470747e-08 5.04075714729041e-08 EIF2AK2/IRF7/IRF9/OAS1/OAS2/OAS3/STAT1 7
GO B_12_15 GO:0045088 regulation of innate immune response 9/28 470/18986 1.47066344489717e-08 3.81093657895093e-07 2.34902307674651e-07 DDX60/EIF2AK2/IRF7/ISG15/NMI/OAS1/OAS3/PARP9/PLSCR1 9
GO B_12_15 GO:0035455 response to interferon-alpha 4/28 20/18986 1.80343346625195e-08 4.47852644119234e-07 2.76051877071022e-07 EIF2AK2/IFITM1/MX2/OAS1 4
MeSH_gene2pubmed B_12_15 D019562 Viral Load 7/30 269/26076 1.91143634572414e-08 1.33684699573676e-06 8.67615285475421e-07 EIF2AK2/IFI44/IRF7/MX1/OAS1/STAT1/TNFSF10 7
MeSH_gene2pubmed B_12_15 D017471 Receptors, Interferon 7/30 273/26076 2.11537814261358e-08 1.43596845680945e-06 9.31945231250501e-07 IFI44/IRF7/IRF9/ISG15/OAS1/STAT1/TNFSF10 7
MeSH_gene2pubmed B_12_15 D051856 Fanconi Anemia Complementation Group Proteins 6/30 162/26076 2.74972244988548e-08 1.81324554695305e-06 1.17679851013144e-06 EIF2AK2/IFIT3/IRF9/MX1/STAT1/TNFSF10 6
MeSH_gene2pubmed B_12_15 D051217 Toll-Like Receptor 9 6/30 164/26076 2.95853084629375e-08 1.89674699812389e-06 1.2309910509579e-06 EIF2AK2/IRF7/MX1/STAT1/TNFSF10/UBE2L6 6
GO B_12_15 GO:0050688 regulation of defense response to virus 5/28 66/18986 4.01900440043872e-08 9.5813064906459e-07 5.905821203171e-07 DTX3L/HERC5/PARP9/STAT1/TRIM22 5