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Selected Module: B_12_15


Module Info

Module_Name B_12_15
Cell_Type B
Name B_12_15: response to virus
Meta_Module B_20
Gene_Number 30

Genes:

CHMP5, DDX60, DDX60L, DTX3L, EIF2AK2, EPSTI1, HERC5, IFI44, IFI44L, IFIT2, IFIT3, IFITM1, IRF7, IRF9, ISG15, LY6E, MX1, MX2, NMI, OAS1, OAS2, OAS3, PARP9, PLSCR1, SAMD9L, STAT1, TNFSF10, TRIM22, UBE2L6, XAF1


UMAP Visualizations


UMAP for B_12_15

UMAP for B_12_15


Word Cloud

Enriched TF

Wordcloud for B_12_15
TF p.adjust Genes
ISRE 4.33682855335823e-12 DDX60/DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/IRF9/ISG15/PARP9/XAF1
STTTCRNTTT 6.57893968504148e-10 DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/ISG15/PARP9/XAF1
IRF 2.97425446129766e-09 DDX60/DTX3L/IFI44/IFIT2/IRF9/ISG15/PARP9/UBE2L6
IRF7 1.3940631900746e-07 DDX60/DTX3L/EPSTI1/IFIT2/ISG15/PARP9/XAF1
ICSBP 8.0670788913588e-05 DTX3L/IFI44/IFIT3/ISG15/PARP9
IRF1 8.0670788913588e-05 DTX3L/IRF9/ISG15/PARP9/XAF1
IRF2 0.0036613358814046 DTX3L/PARP9/XAF1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
MeSH_gene2pubmed B_12_15 D051196 Toll-Like Receptor 3 7/30 165/26076 6.43706224484182e-10 5.5024961707759e-08 3.57112653973096e-08 EIF2AK2/IRF7/ISG15/MX1/OAS1/STAT1/TNFSF10 7
reactome B_12_15 R-HSA-877300 Interferon gamma signaling 7/24 96/11146 8.65138091654241e-10 1.95521208713858e-08 1.2385134785787e-08 IRF7/IRF9/OAS1/OAS2/OAS3/STAT1/TRIM22 7
GO B_12_15 GO:0032481 positive regulation of type I interferon production 6/28 75/18986 1.08962233477969e-09 3.24707455764348e-08 2.00146418335848e-08 IRF7/ISG15/OAS1/OAS2/OAS3/STAT1 6
GO B_12_15 GO:0035456 response to interferon-beta 5/28 34/18986 1.29248426263659e-09 3.66819343110194e-08 2.2610376323818e-08 IFITM1/OAS1/PLSCR1/STAT1/XAF1 5
MeSH_gene2pubmed B_12_15 D052218 Fanconi Anemia Complementation Group C Protein 6/30 99/26076 1.41668545726713e-09 1.16775358406162e-07 7.57873460786137e-08 EIF2AK2/IFIT3/IRF9/MX1/STAT1/TNFSF10 6
WikiPathways B_12_15 WP4630 Measles virus infection 8/24 136/8836 1.5311153326925e-09 3.1234752786927e-08 2.38531651829989e-08 EIF2AK2/IRF7/IRF9/MX1/OAS1/OAS2/OAS3/STAT1 8
GO B_12_15 GO:0003725 double-stranded RNA binding 6/30 73/18737 1.56365063038473e-09 1.37601255473856e-07 9.54649858550675e-08 DDX60/DDX60L/EIF2AK2/OAS1/OAS2/OAS3 6
MeSH_gene2pubmed B_12_15 D050832 Interferon-Stimulated Gene Factor 3 6/30 106/26076 2.14487156873829e-09 1.70702192436137e-07 1.10785925310874e-07 IRF7/IRF9/ISG15/NMI/OAS1/STAT1 6
MeSH_gene2pubmed B_12_15 D029082 Sendai virus 6/30 111/26076 2.83564893720362e-09 2.18155924902198e-07 1.41583453952307e-07 EIF2AK2/IFIT2/IRF7/IRF9/STAT1/TNFSF10 6
MeSH_gene2pubmed B_12_15 D014777 Virus Diseases 7/30 207/26076 3.12923368817533e-09 2.32976495235763e-07 1.51202021673124e-07 EIF2AK2/IRF7/IRF9/ISG15/MX1/STAT1/TNFSF10 7