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Selected Module: B_12_15


Module Info

Module_Name B_12_15
Cell_Type B
Name B_12_15: response to virus
Meta_Module B_20
Gene_Number 30

Genes:

CHMP5, DDX60, DDX60L, DTX3L, EIF2AK2, EPSTI1, HERC5, IFI44, IFI44L, IFIT2, IFIT3, IFITM1, IRF7, IRF9, ISG15, LY6E, MX1, MX2, NMI, OAS1, OAS2, OAS3, PARP9, PLSCR1, SAMD9L, STAT1, TNFSF10, TRIM22, UBE2L6, XAF1


UMAP Visualizations


UMAP for B_12_15

UMAP for B_12_15


Word Cloud

Enriched TF

Wordcloud for B_12_15
TF p.adjust Genes
ISRE 4.33682855335823e-12 DDX60/DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/IRF9/ISG15/PARP9/XAF1
STTTCRNTTT 6.57893968504148e-10 DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/ISG15/PARP9/XAF1
IRF 2.97425446129766e-09 DDX60/DTX3L/IFI44/IFIT2/IRF9/ISG15/PARP9/UBE2L6
IRF7 1.3940631900746e-07 DDX60/DTX3L/EPSTI1/IFIT2/ISG15/PARP9/XAF1
ICSBP 8.0670788913588e-05 DTX3L/IFI44/IFIT3/ISG15/PARP9
IRF1 8.0670788913588e-05 DTX3L/IRF9/ISG15/PARP9/XAF1
IRF2 0.0036613358814046 DTX3L/PARP9/XAF1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
MeSH_gene2pubmed B_12_15 D050834 Interferon-Stimulated Gene Factor 3, gamma Subunit 6/30 68/26076 1.41814590751692e-10 1.48776397934048e-08 9.65560586792621e-09 IRF7/IRF9/ISG15/MX1/NMI/STAT1 6
WikiPathways B_12_15 WP4880 Host pathogen interaction of human coronaviruses interferon induction 6/24 33/8836 2.15483975194203e-10 7.32645515660291e-09 5.5950225138144e-09 EIF2AK2/IRF9/OAS1/OAS2/OAS3/STAT1 6
GO B_12_15 GO:0032608 interferon-beta production 6/28 60/18986 2.74987869560102e-10 8.62593527672742e-09 5.31693997099588e-09 IRF7/ISG15/NMI/OAS1/OAS2/OAS3 6
GO B_12_15 GO:0032648 regulation of interferon-beta production 6/28 60/18986 2.74987869560102e-10 8.62593527672742e-09 5.31693997099588e-09 IRF7/ISG15/NMI/OAS1/OAS2/OAS3 6
MeSH_gene2pubmed B_12_15 D050856 Interferon Regulatory Factor-1 8/30 258/26076 3.9952007652319e-10 4.00909711571966e-08 2.6019087821167e-08 IRF7/IRF9/ISG15/MX1/OAS1/STAT1/TNFSF10/XAF1 8
MeSH_gene2pubmed B_12_15 D007369 Interferon Inducers 6/30 83/26076 4.83280798731154e-10 4.58407354950094e-08 2.97506916945172e-08 IFIT2/IFIT3/IRF7/ISG15/NMI/STAT1 6
MeSH_gene2pubmed B_12_15 D014780 Viruses 7/30 159/26076 4.96541762294296e-10 4.58407354950094e-08 2.97506916945172e-08 IRF7/IRF9/ISG15/MX1/OAS1/STAT1/TNFSF10 7
KEGG B_12_15 hsa05169 Epstein-Barr virus infection 8/15 204/8541 5.15119679387536e-10 4.84212498624284e-09 3.14494120047127e-09 EIF2AK2/IRF7/IRF9/ISG15/OAS1/OAS2/OAS3/STAT1 8
WikiPathways B_12_15 WP619 Type II interferon signaling 6/24 38/8836 5.32422512961058e-10 1.3576774080507e-08 1.03682278839785e-08 EIF2AK2/IFIT2/IRF9/ISG15/OAS1/STAT1 6
MeSH_gene2pubmed B_12_15 D015852 Eukaryotic Initiation Factor-2 8/30 269/26076 5.55847821395002e-10 4.93421835299871e-08 3.20231356212586e-08 EIF2AK2/IRF9/MX1/OAS1/OAS2/OAS3/STAT1/TNFSF10 8