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Selected Module: B_12_15


Module Info

Module_Name B_12_15
Cell_Type B
Name B_12_15: response to virus
Meta_Module B_20
Gene_Number 30

Genes:

CHMP5, DDX60, DDX60L, DTX3L, EIF2AK2, EPSTI1, HERC5, IFI44, IFI44L, IFIT2, IFIT3, IFITM1, IRF7, IRF9, ISG15, LY6E, MX1, MX2, NMI, OAS1, OAS2, OAS3, PARP9, PLSCR1, SAMD9L, STAT1, TNFSF10, TRIM22, UBE2L6, XAF1


UMAP Visualizations


UMAP for B_12_15

UMAP for B_12_15


Word Cloud

Enriched TF

Wordcloud for B_12_15
TF p.adjust Genes
ISRE 4.33682855335823e-12 DDX60/DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/IRF9/ISG15/PARP9/XAF1
STTTCRNTTT 6.57893968504148e-10 DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/ISG15/PARP9/XAF1
IRF 2.97425446129766e-09 DDX60/DTX3L/IFI44/IFIT2/IRF9/ISG15/PARP9/UBE2L6
IRF7 1.3940631900746e-07 DDX60/DTX3L/EPSTI1/IFIT2/ISG15/PARP9/XAF1
ICSBP 8.0670788913588e-05 DTX3L/IFI44/IFIT3/ISG15/PARP9
IRF1 8.0670788913588e-05 DTX3L/IRF9/ISG15/PARP9/XAF1
IRF2 0.0036613358814046 DTX3L/PARP9/XAF1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
MeSH_gene2pubmed B_12_15 D018816 Genes, cdc 3/30 287/26076 0.00429953172639631 0.0336810576009963 0.0218590463222739 NMI/STAT1/TNFSF10 3
MeSH_gene2pubmed B_12_15 D051743 CCAAT-Enhancer-Binding Protein-delta 2/30 85/26076 0.00430498786494536 0.0336810576009963 0.0218590463222739 EIF2AK2/STAT1 2
MeSH_gene2pubmed B_12_15 D051920 NK Cell Lectin-Like Receptor Subfamily D 2/30 85/26076 0.00430498786494536 0.0336810576009963 0.0218590463222739 STAT1/TNFSF10 2
MeSH_gene2pubmed B_12_15 D026121 Indole Alkaloids 2/30 86/26076 0.00440434838096382 0.034342013727245 0.0222880076319755 IRF9/STAT1 2
MeSH_gene2pubmed B_12_15 D005399 D005399 3/30 290/26076 0.00442599710740858 0.0343946172521852 0.0223221473820394 ISG15/MX1/MX2 3
WikiPathways B_12_15 WP4558 Interferon mediated signaling 2/24 37/8836 0.00444372588338274 0.0302173360070026 0.0230761905523034 IRF9/STAT1 2
WikiPathways B_12_15 WP49 IL2 signaling 2/24 37/8836 0.00444372588338274 0.0302173360070026 0.0230761905523034 NMI/STAT1 2
GO B_12_15 GO:0060760 positive regulation of response to cytokine stimulus 2/28 68/18986 0.00449896577399656 0.0270846828414338 0.0166947267955853 IRF7/PARP9 2
MeSH_gene2pubmed B_12_15 D000944 Antigens, Differentiation, B-Lymphocyte 3/30 292/26076 0.0045115554374053 0.0348249831088008 0.0226014553333137 IFI44/IFITM1/STAT1 3
MeSH_gene2pubmed B_12_15 D016559 Tacrolimus 3/30 292/26076 0.0045115554374053 0.0348249831088008 0.0226014553333137 IRF9/STAT1/TNFSF10 3