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Selected Module: B_12_15


Module Info

Module_Name B_12_15
Cell_Type B
Name B_12_15: response to virus
Meta_Module B_20
Gene_Number 30

Genes:

CHMP5, DDX60, DDX60L, DTX3L, EIF2AK2, EPSTI1, HERC5, IFI44, IFI44L, IFIT2, IFIT3, IFITM1, IRF7, IRF9, ISG15, LY6E, MX1, MX2, NMI, OAS1, OAS2, OAS3, PARP9, PLSCR1, SAMD9L, STAT1, TNFSF10, TRIM22, UBE2L6, XAF1


UMAP Visualizations


UMAP for B_12_15

UMAP for B_12_15


Word Cloud

Enriched TF

Wordcloud for B_12_15
TF p.adjust Genes
ISRE 4.33682855335823e-12 DDX60/DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/IRF9/ISG15/PARP9/XAF1
STTTCRNTTT 6.57893968504148e-10 DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/ISG15/PARP9/XAF1
IRF 2.97425446129766e-09 DDX60/DTX3L/IFI44/IFIT2/IRF9/ISG15/PARP9/UBE2L6
IRF7 1.3940631900746e-07 DDX60/DTX3L/EPSTI1/IFIT2/ISG15/PARP9/XAF1
ICSBP 8.0670788913588e-05 DTX3L/IFI44/IFIT3/ISG15/PARP9
IRF1 8.0670788913588e-05 DTX3L/IRF9/ISG15/PARP9/XAF1
IRF2 0.0036613358814046 DTX3L/PARP9/XAF1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
MeSH_gene2pubmed B_12_15 D047310 D047310 2/30 81/26076 0.00391820046294489 0.0314000231544334 0.0203786522615884 STAT1/TNFSF10 2
MeSH_gene2pubmed B_12_15 D007140 Immunoglobulin Fab Fragments 3/30 279/26076 0.00397318728301762 0.0317305060526113 0.0205931360543947 IRF9/STAT1/TNFSF10 3
GO B_12_15 GO:0034142 toll-like receptor 4 signaling pathway 2/28 64/18986 0.00399602956492392 0.0248885974069572 0.0153410817644438 NMI/OAS1 2
GO B_12_15 GO:0045637 regulation of myeloid cell differentiation 3/28 219/18986 0.0040089015957515 0.0248885974069572 0.0153410817644438 IRF7/ISG15/STAT1 3
GO B_12_15 GO:0051098 regulation of binding 3/28 219/18986 0.0040089015957515 0.0248885974069572 0.0153410817644438 DTX3L/IFIT2/PARP9 3
GO B_12_15 GO:0030099 myeloid cell differentiation 4/28 451/18986 0.00409362271326393 0.025152568423766 0.0155037908511027 CHMP5/IRF7/ISG15/STAT1 4
MeSH_gene2pubmed B_12_15 D050503 Indoleamine-Pyrrole 2,3,-Dioxygenase 2/30 84/26076 0.00420669040071041 0.0334419230117954 0.0217038476903151 IRF9/STAT1 2
MeSH_gene2pubmed B_12_15 D050378 T-Lymphocytes, Regulatory 3/30 285/26076 0.00421646429654786 0.0334419230117954 0.0217038476903151 IRF7/STAT1/TNFSF10 3
GO B_12_15 GO:1901224 positive regulation of non-canonical NF-kappaB signal transduction 2/28 66/18986 0.00424400417504389 0.0258104743706751 0.0159093174768026 EIF2AK2/NMI 2
MeSH_gene2pubmed B_12_15 D005095 Exoribonucleases 3/30 287/26076 0.00429953172639631 0.0336810576009963 0.0218590463222739 IRF9/NMI/STAT1 3