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Selected Module: B_12_15


Module Info

Module_Name B_12_15
Cell_Type B
Name B_12_15: response to virus
Meta_Module B_20
Gene_Number 30

Genes:

CHMP5, DDX60, DDX60L, DTX3L, EIF2AK2, EPSTI1, HERC5, IFI44, IFI44L, IFIT2, IFIT3, IFITM1, IRF7, IRF9, ISG15, LY6E, MX1, MX2, NMI, OAS1, OAS2, OAS3, PARP9, PLSCR1, SAMD9L, STAT1, TNFSF10, TRIM22, UBE2L6, XAF1


UMAP Visualizations


UMAP for B_12_15

UMAP for B_12_15


Word Cloud

Enriched TF

Wordcloud for B_12_15
TF p.adjust Genes
ISRE 4.33682855335823e-12 DDX60/DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/IRF9/ISG15/PARP9/XAF1
STTTCRNTTT 6.57893968504148e-10 DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/ISG15/PARP9/XAF1
IRF 2.97425446129766e-09 DDX60/DTX3L/IFI44/IFIT2/IRF9/ISG15/PARP9/UBE2L6
IRF7 1.3940631900746e-07 DDX60/DTX3L/EPSTI1/IFIT2/ISG15/PARP9/XAF1
ICSBP 8.0670788913588e-05 DTX3L/IFI44/IFIT3/ISG15/PARP9
IRF1 8.0670788913588e-05 DTX3L/IRF9/ISG15/PARP9/XAF1
IRF2 0.0036613358814046 DTX3L/PARP9/XAF1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
MeSH_gene2pubmed B_12_15 D015752 Genes, env 2/30 74/26076 0.00328271625638429 0.0277527806583698 0.0180115875567181 IFITM1/STAT1 2
reactome B_12_15 R-HSA-168276 NS1 Mediated Effects on Host Pathways 2/24 40/11146 0.00329715967184014 0.0248386028611957 0.0157338145743951 EIF2AK2/ISG15 2
GO B_12_15 GO:0031396 regulation of protein ubiquitination 3/28 205/18986 0.00333058480612048 0.0218135004884374 0.0134456228725974 DTX3L/ISG15/NMI 3
MeSH_gene2pubmed B_12_15 D053759 Interleukin-23 2/30 75/26076 0.00337024988182925 0.0283888201724887 0.0184243779556013 STAT1/TNFSF10 2
MeSH_gene2pubmed B_12_15 D001862 Bone Resorption 3/30 265/26076 0.00343961996402621 0.0288197615081971 0.0187040593934892 IRF9/STAT1/TNFSF10 3
MeSH_gene2pubmed B_12_15 D012470 Salivary Glands, Minor 2/30 76/26076 0.00345887085691967 0.0288197615081971 0.0187040593934892 STAT1/TNFSF10 2
MeSH_gene2pubmed B_12_15 D019154 Protein Splicing 2/30 76/26076 0.00345887085691967 0.0288197615081971 0.0187040593934892 STAT1/TNFSF10 2
reactome B_12_15 R-HSA-9694516 SARS-CoV-2 Infection 4/24 299/11146 0.00352886870303795 0.0249226352152055 0.0157870441978013 IRF7/ISG15/PARP9/STAT1 4
MeSH_gene2pubmed B_12_15 D017088 AIDS-Related Opportunistic Infections 2/30 77/26076 0.00354857673453182 0.0291578805671495 0.0189234990636932 IRF9/STAT1 2
MeSH_gene2pubmed B_12_15 D019077 Helix-Turn-Helix Motifs 2/30 77/26076 0.00354857673453182 0.0291578805671495 0.0189234990636932 IRF7/IRF9 2