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Selected Module: B_12_15


Module Info

Module_Name B_12_15
Cell_Type B
Name B_12_15: response to virus
Meta_Module B_20
Gene_Number 30

Genes:

CHMP5, DDX60, DDX60L, DTX3L, EIF2AK2, EPSTI1, HERC5, IFI44, IFI44L, IFIT2, IFIT3, IFITM1, IRF7, IRF9, ISG15, LY6E, MX1, MX2, NMI, OAS1, OAS2, OAS3, PARP9, PLSCR1, SAMD9L, STAT1, TNFSF10, TRIM22, UBE2L6, XAF1


UMAP Visualizations


UMAP for B_12_15

UMAP for B_12_15


Word Cloud

Enriched TF

Wordcloud for B_12_15
TF p.adjust Genes
ISRE 4.33682855335823e-12 DDX60/DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/IRF9/ISG15/PARP9/XAF1
STTTCRNTTT 6.57893968504148e-10 DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/ISG15/PARP9/XAF1
IRF 2.97425446129766e-09 DDX60/DTX3L/IFI44/IFIT2/IRF9/ISG15/PARP9/UBE2L6
IRF7 1.3940631900746e-07 DDX60/DTX3L/EPSTI1/IFIT2/ISG15/PARP9/XAF1
ICSBP 8.0670788913588e-05 DTX3L/IFI44/IFIT3/ISG15/PARP9
IRF1 8.0670788913588e-05 DTX3L/IRF9/ISG15/PARP9/XAF1
IRF2 0.0036613358814046 DTX3L/PARP9/XAF1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
MeSH_gene2pubmed B_12_15 D009169 Mycobacterium tuberculosis 3/30 256/26076 0.00312131528225165 0.0271848893261766 0.0176430254087154 IRF9/STAT1/TNFSF10 3
WikiPathways B_12_15 WP4912 SARS coronavirus and innate immunity 2/24 31/8836 0.00313356512735481 0.0245864340761685 0.0187760177671462 IRF9/STAT1 2
reactome B_12_15 R-HSA-110313 Translesion synthesis by Y family DNA polymerases bypasses lesions on DNA template 2/24 39/11146 0.00313641441120602 0.0248386028611957 0.0157338145743951 ISG15/UBE2L6 2
MeSH_gene2pubmed B_12_15 D015526 AIDS Dementia Complex 3/30 257/26076 0.00315574267033642 0.0272788542439568 0.017704008751779 EIF2AK2/STAT1/TNFSF10 3
MeSH_gene2pubmed B_12_15 D030361 Papillomavirus Infections 3/30 257/26076 0.00315574267033642 0.0272788542439568 0.017704008751779 DTX3L/IRF9/TNFSF10 3
MeSH_gene2pubmed B_12_15 D011969 Receptors, Histamine H1 2/30 73/26076 0.00319627243158037 0.0275261073585354 0.0178644763163349 EIF2AK2/STAT1 2
MeSH_gene2pubmed B_12_15 D012514 Sarcoma, Kaposi 3/30 259/26076 0.00322529917378145 0.0276728271118498 0.0179596976102172 IRF7/STAT1/TNFSF10 3
MeSH_gene2pubmed B_12_15 D013937 Thymidine Kinase 3/30 260/26076 0.00326042933593815 0.0277527806583698 0.0180115875567181 OAS1/STAT1/TNFSF10 3
MeSH_gene2pubmed B_12_15 D003716 Dengue Virus 2/30 74/26076 0.00328271625638429 0.0277527806583698 0.0180115875567181 STAT1/TNFSF10 2
MeSH_gene2pubmed B_12_15 D012229 Rhinovirus 2/30 74/26076 0.00328271625638429 0.0277527806583698 0.0180115875567181 EIF2AK2/STAT1 2