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Selected Module: B_12_15


Module Info

Module_Name B_12_15
Cell_Type B
Name B_12_15: response to virus
Meta_Module B_20
Gene_Number 30

Genes:

CHMP5, DDX60, DDX60L, DTX3L, EIF2AK2, EPSTI1, HERC5, IFI44, IFI44L, IFIT2, IFIT3, IFITM1, IRF7, IRF9, ISG15, LY6E, MX1, MX2, NMI, OAS1, OAS2, OAS3, PARP9, PLSCR1, SAMD9L, STAT1, TNFSF10, TRIM22, UBE2L6, XAF1


UMAP Visualizations


UMAP for B_12_15

UMAP for B_12_15


Word Cloud

Enriched TF

Wordcloud for B_12_15
TF p.adjust Genes
ISRE 4.33682855335823e-12 DDX60/DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/IRF9/ISG15/PARP9/XAF1
STTTCRNTTT 6.57893968504148e-10 DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/ISG15/PARP9/XAF1
IRF 2.97425446129766e-09 DDX60/DTX3L/IFI44/IFIT2/IRF9/ISG15/PARP9/UBE2L6
IRF7 1.3940631900746e-07 DDX60/DTX3L/EPSTI1/IFIT2/ISG15/PARP9/XAF1
ICSBP 8.0670788913588e-05 DTX3L/IFI44/IFIT3/ISG15/PARP9
IRF1 8.0670788913588e-05 DTX3L/IRF9/ISG15/PARP9/XAF1
IRF2 0.0036613358814046 DTX3L/PARP9/XAF1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
GO B_12_15 GO:0140374 antiviral innate immune response 7/28 59/18986 2.17918917683643e-12 1.18072431763137e-10 7.2778662460853e-11 EIF2AK2/IFIT2/IFIT3/MX1/OAS1/OAS2/OAS3 7
GO B_12_15 GO:0140888 interferon-mediated signaling pathway 8/28 112/18986 3.20570450972671e-12 1.59216657316426e-10 9.81395503416334e-11 IFITM1/IRF7/ISG15/OAS1/OAS2/OAS3/PARP9/STAT1 8
MeSH_gene2pubmed B_12_15 D009522 Newcastle disease virus 6/30 43/26076 8.05651267677087e-12 1.52049530589436e-09 9.8680325653912e-10 IFIT2/IFITM1/IRF7/IRF9/STAT1/TNFSF10 6
MeSH_gene2pubmed B_12_15 D050838 Interferon Regulatory Factor-3 8/30 160/26076 8.79063402915361e-12 1.52049530589436e-09 9.8680325653912e-10 EIF2AK2/IRF7/IRF9/ISG15/OAS1/STAT1/TNFSF10/UBE2L6 8
GO B_12_15 GO:0032479 regulation of type I interferon production 8/28 128/18986 9.49486125618079e-12 4.04209807763125e-10 2.49150870556924e-10 IRF7/ISG15/NMI/OAS1/OAS2/OAS3/STAT1/XAF1 8
GO B_12_15 GO:0032606 type I interferon production 8/28 128/18986 9.49486125618079e-12 4.04209807763125e-10 2.49150870556924e-10 IRF7/ISG15/NMI/OAS1/OAS2/OAS3/STAT1/XAF1 8
MeSH_gene2pubmed B_12_15 D008251 Macaca 9/30 259/26076 9.76392763796047e-12 1.52049530589436e-09 9.8680325653912e-10 EIF2AK2/IFI44/IFIT3/IRF7/ISG15/MX1/STAT1/TNFSF10/TRIM22 9
MeSH_gene2pubmed B_12_15 D012330 RNA, Double-Stranded 10/30 387/26076 1.06518681252074e-11 1.52049530589436e-09 9.8680325653912e-10 EIF2AK2/IFIT2/IRF7/IRF9/ISG15/OAS1/OAS2/OAS3/STAT1/TNFSF10 10
MeSH_gene2pubmed B_12_15 D009980 Influenza A virus 8/30 164/26076 1.07254468225153e-11 1.52049530589436e-09 9.8680325653912e-10 EIF2AK2/IRF7/IRF9/ISG15/MX1/MX2/STAT1/TNFSF10 8
GO B_12_15 GO:0019079 viral genome replication 8/28 130/18986 1.07661132651017e-11 4.27773567066709e-10 2.63675335404948e-10 EIF2AK2/IFITM1/ISG15/MX1/OAS1/OAS2/OAS3/PLSCR1 8