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Selected Module: B_12_15


Module Info

Module_Name B_12_15
Cell_Type B
Name B_12_15: response to virus
Meta_Module B_20
Gene_Number 30

Genes:

CHMP5, DDX60, DDX60L, DTX3L, EIF2AK2, EPSTI1, HERC5, IFI44, IFI44L, IFIT2, IFIT3, IFITM1, IRF7, IRF9, ISG15, LY6E, MX1, MX2, NMI, OAS1, OAS2, OAS3, PARP9, PLSCR1, SAMD9L, STAT1, TNFSF10, TRIM22, UBE2L6, XAF1


UMAP Visualizations


UMAP for B_12_15

UMAP for B_12_15


Word Cloud

Enriched TF

Wordcloud for B_12_15
TF p.adjust Genes
ISRE 4.33682855335823e-12 DDX60/DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/IRF9/ISG15/PARP9/XAF1
STTTCRNTTT 6.57893968504148e-10 DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/ISG15/PARP9/XAF1
IRF 2.97425446129766e-09 DDX60/DTX3L/IFI44/IFIT2/IRF9/ISG15/PARP9/UBE2L6
IRF7 1.3940631900746e-07 DDX60/DTX3L/EPSTI1/IFIT2/ISG15/PARP9/XAF1
ICSBP 8.0670788913588e-05 DTX3L/IFI44/IFIT3/ISG15/PARP9
IRF1 8.0670788913588e-05 DTX3L/IRF9/ISG15/PARP9/XAF1
IRF2 0.0036613358814046 DTX3L/PARP9/XAF1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
MeSH_gene2pubmed B_12_15 D009161 Mycobacterium 2/30 62/26076 0.00231802207711145 0.0226694701439543 0.0147125130050383 ISG15/STAT1 2
MeSH_gene2pubmed B_12_15 D048015 TNF Receptor-Associated Factor 5 2/30 62/26076 0.00231802207711145 0.0226694701439543 0.0147125130050383 EIF2AK2/TNFSF10 2
MeSH_gene2pubmed B_12_15 D020079 Terminal Repeat Sequences 3/30 231/26076 0.00233500807090437 0.0227392347158113 0.0147577902949008 EIF2AK2/STAT1/TRIM22 3
MeSH_gene2pubmed B_12_15 D053246 Receptor Activator of Nuclear Factor-kappa B 3/30 232/26076 0.00236376999668779 0.022914817267801 0.0148717435793491 IRF9/STAT1/TNFSF10 3
GO B_12_15 GO:0001818 negative regulation of cytokine production 4/28 388/18986 0.00238482368843691 0.0169208918846238 0.0104298680108331 NMI/OAS1/OAS3/XAF1 4
MeSH_gene2pubmed B_12_15 D053631 Interleukin Receptor Common gamma Subunit 2/30 63/26076 0.00239231521659871 0.022914817267801 0.0148717435793491 IRF7/STAT1 2
MeSH_gene2pubmed B_12_15 D003588 Cytopathogenic Effect, Viral 3/30 233/26076 0.00239275171643849 0.022914817267801 0.0148717435793491 IRF9/STAT1/TNFSF10 3
MeSH_gene2pubmed B_12_15 D020031 Epstein-Barr Virus Infections 3/30 233/26076 0.00239275171643849 0.022914817267801 0.0148717435793491 IRF7/STAT1/TNFSF10 3
reactome B_12_15 R-HSA-9705671 SARS-CoV-2 activates/modulates innate and adaptive immune responses 3/24 126/11146 0.0024001019856391 0.0208624249520937 0.0132151364391465 IRF7/ISG15/STAT1 3
GO B_12_15 GO:0002262 myeloid cell homeostasis 3/28 183/18986 0.0024167752296749 0.0169458592574852 0.0104452576489974 CHMP5/ISG15/STAT1 3