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Selected Module: B_12_15


Module Info

Module_Name B_12_15
Cell_Type B
Name B_12_15: response to virus
Meta_Module B_20
Gene_Number 30

Genes:

CHMP5, DDX60, DDX60L, DTX3L, EIF2AK2, EPSTI1, HERC5, IFI44, IFI44L, IFIT2, IFIT3, IFITM1, IRF7, IRF9, ISG15, LY6E, MX1, MX2, NMI, OAS1, OAS2, OAS3, PARP9, PLSCR1, SAMD9L, STAT1, TNFSF10, TRIM22, UBE2L6, XAF1


UMAP Visualizations


UMAP for B_12_15

UMAP for B_12_15


Word Cloud

Enriched TF

Wordcloud for B_12_15
TF p.adjust Genes
ISRE 4.33682855335823e-12 DDX60/DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/IRF9/ISG15/PARP9/XAF1
STTTCRNTTT 6.57893968504148e-10 DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/ISG15/PARP9/XAF1
IRF 2.97425446129766e-09 DDX60/DTX3L/IFI44/IFIT2/IRF9/ISG15/PARP9/UBE2L6
IRF7 1.3940631900746e-07 DDX60/DTX3L/EPSTI1/IFIT2/ISG15/PARP9/XAF1
ICSBP 8.0670788913588e-05 DTX3L/IFI44/IFIT3/ISG15/PARP9
IRF1 8.0670788913588e-05 DTX3L/IRF9/ISG15/PARP9/XAF1
IRF2 0.0036613358814046 DTX3L/PARP9/XAF1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
GO B_12_15 GO:0032480 negative regulation of type I interferon production 2/28 47/18986 0.00217611023860606 0.0156260446049303 0.00963173713726716 NMI/XAF1 2
WikiPathways B_12_15 WP5145 COVID 19 structural coverage map 2/24 26/8836 0.00220833830580353 0.0204773188356327 0.0156379937444461 ISG15/PARP9 2
MeSH_gene2pubmed B_12_15 D015254 DNA Modification Methylases 3/30 227/26076 0.00222214644285865 0.0224290486237834 0.0145564791533539 STAT1/TNFSF10/XAF1 3
MeSH_gene2pubmed B_12_15 D018941 Antigens, CD19 3/30 227/26076 0.00222214644285865 0.0224290486237834 0.0145564791533539 IFITM1/STAT1/TNFSF10 3
MeSH_gene2pubmed B_12_15 D007107 Immune System 4/30 487/26076 0.00224087285902126 0.0224290486237834 0.0145564791533539 IRF7/IRF9/STAT1/TNFSF10 4
MeSH_gene2pubmed B_12_15 D045169 Severe Acute Respiratory Syndrome 2/30 61/26076 0.0022448484541135 0.0224290486237834 0.0145564791533539 MX1/OAS1 2
MeSH_gene2pubmed B_12_15 D054298 Human Immunodeficiency Virus Proteins 2/30 61/26076 0.0022448484541135 0.0224290486237834 0.0145564791533539 EIF2AK2/TRIM22 2
MeSH_gene2pubmed B_12_15 D018121 Receptors, Cytokine 4/30 489/26076 0.00227439964515941 0.0225663088719691 0.0146455612171905 IRF9/OAS1/STAT1/TNFSF10 4
MeSH_gene2pubmed B_12_15 D038762 Ribosomal Protein S6 Kinases, 70-kDa 3/30 229/26076 0.00227814123360866 0.0225663088719691 0.0146455612171905 IFI44/STAT1/TNFSF10 3
MeSH_gene2pubmed B_12_15 D007778 D007778 2/30 62/26076 0.00231802207711145 0.0226694701439543 0.0147125130050383 IRF9/STAT1 2