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Selected Module: B_12_15


Module Info

Module_Name B_12_15
Cell_Type B
Name B_12_15: response to virus
Meta_Module B_20
Gene_Number 30

Genes:

CHMP5, DDX60, DDX60L, DTX3L, EIF2AK2, EPSTI1, HERC5, IFI44, IFI44L, IFIT2, IFIT3, IFITM1, IRF7, IRF9, ISG15, LY6E, MX1, MX2, NMI, OAS1, OAS2, OAS3, PARP9, PLSCR1, SAMD9L, STAT1, TNFSF10, TRIM22, UBE2L6, XAF1


UMAP Visualizations


UMAP for B_12_15

UMAP for B_12_15


Word Cloud

Enriched TF

Wordcloud for B_12_15
TF p.adjust Genes
ISRE 4.33682855335823e-12 DDX60/DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/IRF9/ISG15/PARP9/XAF1
STTTCRNTTT 6.57893968504148e-10 DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/ISG15/PARP9/XAF1
IRF 2.97425446129766e-09 DDX60/DTX3L/IFI44/IFIT2/IRF9/ISG15/PARP9/UBE2L6
IRF7 1.3940631900746e-07 DDX60/DTX3L/EPSTI1/IFIT2/ISG15/PARP9/XAF1
ICSBP 8.0670788913588e-05 DTX3L/IFI44/IFIT3/ISG15/PARP9
IRF1 8.0670788913588e-05 DTX3L/IRF9/ISG15/PARP9/XAF1
IRF2 0.0036613358814046 DTX3L/PARP9/XAF1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
reactome B_12_15 R-HSA-9679506 SARS-CoV Infections 5/24 414/11146 0.00163430097793628 0.0167887282278909 0.0106346857894419 IRF7/ISG15/NMI/PARP9/STAT1 5
MeSH_gene2pubmed B_12_15 D006567 Herpesvirus 2, Saimiriine 2/30 52/26076 0.00163707819134894 0.0187156747902439 0.0121464951320428 STAT1/TNFSF10 2
MeSH_gene2pubmed B_12_15 D020365 RNA Helicases 4/30 447/26076 0.00164018310229121 0.0187156747902439 0.0121464951320428 IRF7/ISG15/STAT1/UBE2L6 4
GO B_12_15 GO:0097696 cell surface receptor signaling pathway via STAT 3/28 160/18986 0.00164830473847535 0.0121282669645841 0.00747574208873162 NMI/PARP9/STAT1 3
MeSH_gene2pubmed B_12_15 D022423 Myeloid Cells 4/30 448/26076 0.00165364120836127 0.0187156747902439 0.0121464951320428 PLSCR1/STAT1/TNFSF10/TRIM22 4
MeSH_gene2pubmed B_12_15 D001578 Benzopyrans 3/30 205/26076 0.00166235412998267 0.0187156747902439 0.0121464951320428 PLSCR1/STAT1/TNFSF10 3
MeSH_gene2pubmed B_12_15 D050800 STAT6 Transcription Factor 3/30 205/26076 0.00166235412998267 0.0187156747902439 0.0121464951320428 IRF9/STAT1/TNFSF10 3
MeSH_gene2pubmed B_12_15 D000498 Allyl Compounds 2/30 53/26076 0.00170006311017716 0.018955293035212 0.0123020076571681 STAT1/TNFSF10 2
MeSH_gene2pubmed B_12_15 D007069 Ifosfamide 2/30 53/26076 0.00170006311017716 0.018955293035212 0.0123020076571681 STAT1/TNFSF10 2
MeSH_gene2pubmed B_12_15 D015964 Gene Expression Regulation, Bacterial 3/30 208/26076 0.00173275333896912 0.0192268976266381 0.0124782793590742 IRF7/IRF9/TNFSF10 3