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Selected Module: B_12_15


Module Info

Module_Name B_12_15
Cell_Type B
Name B_12_15: response to virus
Meta_Module B_20
Gene_Number 30

Genes:

CHMP5, DDX60, DDX60L, DTX3L, EIF2AK2, EPSTI1, HERC5, IFI44, IFI44L, IFIT2, IFIT3, IFITM1, IRF7, IRF9, ISG15, LY6E, MX1, MX2, NMI, OAS1, OAS2, OAS3, PARP9, PLSCR1, SAMD9L, STAT1, TNFSF10, TRIM22, UBE2L6, XAF1


UMAP Visualizations


UMAP for B_12_15

UMAP for B_12_15


Word Cloud

Enriched TF

Wordcloud for B_12_15
TF p.adjust Genes
ISRE 4.33682855335823e-12 DDX60/DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/IRF9/ISG15/PARP9/XAF1
STTTCRNTTT 6.57893968504148e-10 DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/ISG15/PARP9/XAF1
IRF 2.97425446129766e-09 DDX60/DTX3L/IFI44/IFIT2/IRF9/ISG15/PARP9/UBE2L6
IRF7 1.3940631900746e-07 DDX60/DTX3L/EPSTI1/IFIT2/ISG15/PARP9/XAF1
ICSBP 8.0670788913588e-05 DTX3L/IFI44/IFIT3/ISG15/PARP9
IRF1 8.0670788913588e-05 DTX3L/IRF9/ISG15/PARP9/XAF1
IRF2 0.0036613358814046 DTX3L/PARP9/XAF1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
KEGG B_12_15 hsa05164 Influenza A 10/15 173/8541 2.46648614729881e-14 1.15924848923044e-12 7.52927350228059e-13 EIF2AK2/IRF7/IRF9/MX1/MX2/OAS1/OAS2/OAS3/STAT1/TNFSF10 10
MeSH_gene2pubmed B_12_15 D006526 Hepatitis C 11/30 345/26076 8.09618126082005e-14 1.86859863499727e-11 1.2127227299102e-11 EIF2AK2/IFI44/IFIT2/IRF7/IRF9/ISG15/MX1/OAS1/OAS2/STAT1/TNFSF10 11
reactome B_12_15 R-HSA-1169410 Antiviral mechanism by IFN-stimulated genes 10/24 149/11146 2.24665785503185e-13 8.4624112539533e-12 5.36044681200582e-12 EIF2AK2/HERC5/ISG15/MX1/MX2/OAS1/OAS2/OAS3/STAT1/UBE2L6 10
KEGG B_12_15 hsa05162 Measles 9/15 139/8541 2.84425343700793e-13 6.68399557696864e-12 4.34122893017e-12 EIF2AK2/IRF7/IRF9/MX1/MX2/OAS1/OAS2/OAS3/STAT1 9
GO B_12_15 GO:0045069 regulation of viral genome replication 8/28 85/18986 3.32791551804486e-13 2.47929706094342e-11 1.52821383657586e-11 EIF2AK2/IFITM1/ISG15/MX1/OAS1/OAS2/OAS3/PLSCR1 8
GO B_12_15 GO:0019058 viral life cycle 11/28 323/18986 4.83944337955309e-13 3.20478694912627e-11 1.97539852568892e-11 CHMP5/EIF2AK2/IFITM1/ISG15/LY6E/MX1/OAS1/OAS2/OAS3/PLSCR1/TRIM22 11
GO B_12_15 GO:0034340 response to type I interferon 8/28 92/18986 6.39453842575163e-13 3.81114490174797e-11 2.34915148482876e-11 IFITM1/IRF7/ISG15/MX1/OAS1/OAS2/OAS3/STAT1 8
KEGG B_12_15 hsa05160 Hepatitis C 9/15 159/8541 9.73969473071436e-13 1.52588550781192e-11 9.91056656809531e-12 EIF2AK2/IRF7/IRF9/MX1/MX2/OAS1/OAS2/OAS3/STAT1 9
MeSH_gene2pubmed B_12_15 D015382 D015382 10/30 309/26076 1.15023317008511e-12 2.41339832414221e-10 1.56629837419245e-10 DTX3L/IFITM1/IRF9/ISG15/MX1/MX2/NMI/PARP9/STAT1/TNFSF10 10
WikiPathways B_12_15 WP4868 Type I interferon induction and signaling during SARS CoV 2 infection 7/24 32/8836 1.34168672382457e-12 1.36852045830106e-10 1.04510334276862e-10 EIF2AK2/IRF7/IRF9/OAS1/OAS2/OAS3/STAT1 7