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Selected Module: B_12_15


Module Info

Module_Name B_12_15
Cell_Type B
Name B_12_15: response to virus
Meta_Module B_20
Gene_Number 30

Genes:

CHMP5, DDX60, DDX60L, DTX3L, EIF2AK2, EPSTI1, HERC5, IFI44, IFI44L, IFIT2, IFIT3, IFITM1, IRF7, IRF9, ISG15, LY6E, MX1, MX2, NMI, OAS1, OAS2, OAS3, PARP9, PLSCR1, SAMD9L, STAT1, TNFSF10, TRIM22, UBE2L6, XAF1


UMAP Visualizations


UMAP for B_12_15

UMAP for B_12_15


Word Cloud

Enriched TF

Wordcloud for B_12_15
TF p.adjust Genes
ISRE 4.33682855335823e-12 DDX60/DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/IRF9/ISG15/PARP9/XAF1
STTTCRNTTT 6.57893968504148e-10 DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/ISG15/PARP9/XAF1
IRF 2.97425446129766e-09 DDX60/DTX3L/IFI44/IFIT2/IRF9/ISG15/PARP9/UBE2L6
IRF7 1.3940631900746e-07 DDX60/DTX3L/EPSTI1/IFIT2/ISG15/PARP9/XAF1
ICSBP 8.0670788913588e-05 DTX3L/IFI44/IFIT3/ISG15/PARP9
IRF1 8.0670788913588e-05 DTX3L/IRF9/ISG15/PARP9/XAF1
IRF2 0.0036613358814046 DTX3L/PARP9/XAF1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
MeSH_gene2pubmed B_12_15 D010253 Respirovirus Infections 2/30 34/26076 0.00070157379667767 0.0101838510863652 0.00660933143113093 IRF7/STAT1 2
MeSH_gene2pubmed B_12_15 D053677 Receptors, Oncostatin M 2/30 34/26076 0.00070157379667767 0.0101838510863652 0.00660933143113093 STAT1/TNFSF10 2
hallmark B_12_15 HALLMARK_INFLAMMATORY_RESPONSE HALLMARK_INFLAMMATORY_RESPONSE 6/25 200/4384 0.00071484542007061 0.00285938168028246 0.00225740658969668 EIF2AK2/IFITM1/IRF7/LY6E/NMI/TNFSF10 6
GO B_12_15 GO:0035458 cellular response to interferon-beta 2/28 27/18986 0.00071957477590462 0.00612666523484508 0.00377641498933404 OAS1/STAT1 2
GO B_12_15 GO:0060333 type II interferon-mediated signaling pathway 2/28 27/18986 0.00071957477590462 0.00612666523484508 0.00377641498933404 PARP9/STAT1 2
GO B_12_15 GO:0034341 response to type II interferon 3/28 121/18986 0.00073630247232471 0.00618079258458494 0.00380977854471944 IFITM1/PARP9/STAT1 3
GO B_12_15 GO:0039529 RIG-I signaling pathway 2/28 28/18986 0.00077422046571207 0.00640882496617215 0.00395033541715663 DDX60/OAS3 2
MeSH_gene2pubmed B_12_15 D005472 Fluorouracil 4/30 365/26076 0.00077607224676215 0.0111253089784289 0.00722033871946747 IFITM1/ISG15/STAT1/TNFSF10 4
MeSH_gene2pubmed B_12_15 D017500 Adenovirus E1A Proteins 4/30 365/26076 0.00077607224676215 0.0111253089784289 0.00722033871946747 EIF2AK2/IRF9/STAT1/TNFSF10 4
MeSH_gene2pubmed B_12_15 D007948 Leukemia, Monocytic, Acute 3/30 158/26076 0.00078581558755191 0.0111398265848138 0.00722976066322631 ISG15/STAT1/TNFSF10 3