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Selected Module: B_12_15
Module Info
| Module_Name | B_12_15 |
| Cell_Type | B |
| Name | B_12_15: response to virus |
| Meta_Module | B_20 |
| Gene_Number | 30 |
Genes:
CHMP5, DDX60, DDX60L, DTX3L, EIF2AK2, EPSTI1, HERC5, IFI44, IFI44L, IFIT2, IFIT3, IFITM1, IRF7, IRF9, ISG15, LY6E, MX1, MX2, NMI, OAS1, OAS2, OAS3, PARP9, PLSCR1, SAMD9L, STAT1, TNFSF10, TRIM22, UBE2L6, XAF1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| ISRE | 4.33682855335823e-12 | DDX60/DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/IRF9/ISG15/PARP9/XAF1 |
| STTTCRNTTT | 6.57893968504148e-10 | DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/ISG15/PARP9/XAF1 |
| IRF | 2.97425446129766e-09 | DDX60/DTX3L/IFI44/IFIT2/IRF9/ISG15/PARP9/UBE2L6 |
| IRF7 | 1.3940631900746e-07 | DDX60/DTX3L/EPSTI1/IFIT2/ISG15/PARP9/XAF1 |
| ICSBP | 8.0670788913588e-05 | DTX3L/IFI44/IFIT3/ISG15/PARP9 |
| IRF1 | 8.0670788913588e-05 | DTX3L/IRF9/ISG15/PARP9/XAF1 |
| IRF2 | 0.0036613358814046 | DTX3L/PARP9/XAF1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_12_15 | R-HSA-168928 | DDX58/IFIH1-mediated induction of interferon-alpha/beta | 4/24 | 82/11146 | 2.58486176047546e-05 | 0.0003245437543708 | 0.00020557964878635 | HERC5/IRF7/ISG15/UBE2L6 | 4 |
| MeSH_gene2pubmed | B_12_15 | D051200 | Toll-Like Receptor 8 | 3/30 | 50/26076 | 2.59662281762044e-05 | 0.00073987721766271 | 0.00048018119161454 | IRF7/STAT1/TNFSF10 | 3 |
| MeSH_gene2pubmed | B_12_15 | D006561 | Herpes Simplex | 4/30 | 152/26076 | 2.70253674794833e-05 | 0.00076066522125179 | 0.00049367263059441 | IRF7/ISG15/STAT1/TNFSF10 | 4 |
| MeSH_gene2pubmed | B_12_15 | D015075 | 2-Aminopurine | 3/30 | 52/26076 | 2.92328323154386e-05 | 0.00081288406004858 | 0.00052756271889497 | EIF2AK2/IRF9/STAT1 | 3 |
| MeSH_gene2pubmed | B_12_15 | D014763 | Viral Matrix Proteins | 5/30 | 329/26076 | 3.41078668167438e-05 | 0.00093715424539339 | 0.00060821421654419 | IRF7/ISG15/STAT1/TNFSF10/TRIM22 | 5 |
| GO | B_12_15 | GO:0002832 | negative regulation of response to biotic stimulus | 4/28 | 127/18986 | 3.45199798137267e-05 | 0.00047846297602281 | 0.00029491977857994 | ISG15/NMI/OAS1/OAS3 | 4 |
| GO | B_12_15 | GO:0000209 | protein polyubiquitination | 5/28 | 263/18986 | 3.71766429119454e-05 | 0.00050357452671635 | 0.00031039828651361 | DTX3L/HERC5/NMI/TRIM22/UBE2L6 | 5 |
| MeSH_gene2pubmed | B_12_15 | D050791 | STAT Transcription Factors | 4/30 | 166/26076 | 3.81457309791868e-05 | 0.00103576878941133 | 0.00067221517254963 | IRF9/MX1/STAT1/TNFSF10 | 4 |
| MeSH_gene2pubmed | B_12_15 | D000956 | Antigens, Viral | 5/30 | 340/26076 | 3.98905605715813e-05 | 0.00107055132324662 | 0.0006947890782541 | IRF7/ISG15/MX1/STAT1/TRIM22 | 5 |
| WikiPathways | B_12_15 | WP4341 | Non genomic actions of 1 25 dihydroxyvitamin D3 | 4/24 | 76/8836 | 4.71343463621114e-05 | 0.00060096291611692 | 0.00045893968826266 | IFI44L/ISG15/OAS2/STAT1 | 4 |