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Selected Module: B_12_15


Module Info

Module_Name B_12_15
Cell_Type B
Name B_12_15: response to virus
Meta_Module B_20
Gene_Number 30

Genes:

CHMP5, DDX60, DDX60L, DTX3L, EIF2AK2, EPSTI1, HERC5, IFI44, IFI44L, IFIT2, IFIT3, IFITM1, IRF7, IRF9, ISG15, LY6E, MX1, MX2, NMI, OAS1, OAS2, OAS3, PARP9, PLSCR1, SAMD9L, STAT1, TNFSF10, TRIM22, UBE2L6, XAF1


UMAP Visualizations


UMAP for B_12_15

UMAP for B_12_15


Word Cloud

Enriched TF

Wordcloud for B_12_15
TF p.adjust Genes
ISRE 4.33682855335823e-12 DDX60/DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/IRF9/ISG15/PARP9/XAF1
STTTCRNTTT 6.57893968504148e-10 DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/ISG15/PARP9/XAF1
IRF 2.97425446129766e-09 DDX60/DTX3L/IFI44/IFIT2/IRF9/ISG15/PARP9/UBE2L6
IRF7 1.3940631900746e-07 DDX60/DTX3L/EPSTI1/IFIT2/ISG15/PARP9/XAF1
ICSBP 8.0670788913588e-05 DTX3L/IFI44/IFIT3/ISG15/PARP9
IRF1 8.0670788913588e-05 DTX3L/IRF9/ISG15/PARP9/XAF1
IRF2 0.0036613358814046 DTX3L/PARP9/XAF1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
MeSH_gene2pubmed B_12_15 D053199 TNF Receptor-Associated Death Domain Protein 3/30 40/26076 1.31911015563354e-05 0.00041805366467472 0.00027131732410477 IRF7/STAT1/TNFSF10 3
MeSH_gene2pubmed B_12_15 D018139 Simplexvirus 5/30 270/26076 1.322266790349e-05 0.00041805366467472 0.00027131732410477 IRF7/MX1/OAS1/STAT1/TNFSF10 5
MeSH_gene2pubmed B_12_15 D014762 Viral Interference 3/30 41/26076 1.4221459172555e-05 0.00044355578067914 0.00028786822763222 IRF7/IRF9/STAT1 3
GO B_12_15 GO:0070566 adenylyltransferase activity 3/30 30/18737 1.46048091122663e-05 0.00064261160093971 0.00044583101500602 OAS1/OAS2/OAS3 3
MeSH_gene2pubmed B_12_15 D005814 Genes, Viral 6/30 476/26076 1.46747606152515e-05 0.0004515913 0.00029308328920004 EIF2AK2/HERC5/IRF7/IRF9/OAS1/STAT1 6
MeSH_gene2pubmed B_12_15 D020529 Multiple Sclerosis, Relapsing-Remitting 4/30 132/26076 1.55232364965493e-05 0.00047141618202678 0.0003059496611439 MX1/STAT1/TNFSF10/XAF1 4
MeSH_gene2pubmed B_12_15 D045325 HCT116 Cells 6/30 486/26076 1.65034907845482e-05 0.00049467606143814 0.00032104535046359 IFI44/IRF7/OAS1/STAT1/TNFSF10/XAF1 6
MeSH_gene2pubmed B_12_15 D022622 Shiga Toxin 1 3/30 46/26076 2.0173117113265e-05 0.00059691736278738 0.00038740007627768 EIF2AK2/IRF9/TNFSF10 3
MeSH_gene2pubmed B_12_15 D019590 Nucleocapsid Proteins 3/30 47/26076 2.15318363363912e-05 0.00062905668689102 0.00040825853573197 IRF9/MX1/STAT1 3
MeSH_gene2pubmed B_12_15 D012328 RNA Viruses 3/30 48/26076 2.294947103467e-05 0.00066209223935022 0.00042969864845178 IRF9/MX1/STAT1 3