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Selected Module: B_12_15


Module Info

Module_Name B_12_15
Cell_Type B
Name B_12_15: response to virus
Meta_Module B_20
Gene_Number 30

Genes:

CHMP5, DDX60, DDX60L, DTX3L, EIF2AK2, EPSTI1, HERC5, IFI44, IFI44L, IFIT2, IFIT3, IFITM1, IRF7, IRF9, ISG15, LY6E, MX1, MX2, NMI, OAS1, OAS2, OAS3, PARP9, PLSCR1, SAMD9L, STAT1, TNFSF10, TRIM22, UBE2L6, XAF1


UMAP Visualizations


UMAP for B_12_15

UMAP for B_12_15


Word Cloud

Enriched TF

Wordcloud for B_12_15
TF p.adjust Genes
ISRE 4.33682855335823e-12 DDX60/DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/IRF9/ISG15/PARP9/XAF1
STTTCRNTTT 6.57893968504148e-10 DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/ISG15/PARP9/XAF1
IRF 2.97425446129766e-09 DDX60/DTX3L/IFI44/IFIT2/IRF9/ISG15/PARP9/UBE2L6
IRF7 1.3940631900746e-07 DDX60/DTX3L/EPSTI1/IFIT2/ISG15/PARP9/XAF1
ICSBP 8.0670788913588e-05 DTX3L/IFI44/IFIT3/ISG15/PARP9
IRF1 8.0670788913588e-05 DTX3L/IRF9/ISG15/PARP9/XAF1
IRF2 0.0036613358814046 DTX3L/PARP9/XAF1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
GO B_12_15 GO:0060759 regulation of response to cytokine stimulus 5/28 199/18986 9.7174503074998e-06 0.00015241053640183 9.39443256874634e-05 IRF7/ISG15/OAS1/OAS3/PARP9 5
GO B_12_15 GO:0045824 negative regulation of innate immune response 4/28 93/18986 1.00940126616198e-05 0.00015425721913654 9.50826023996033e-05 ISG15/NMI/OAS1/OAS3 4
MeSH_gene2pubmed B_12_15 D029043 Ebolavirus 3/30 37/26076 1.03981643521842e-05 0.00035292593124766 0.0002290493478817 ISG15/STAT1/TNFSF10 3
GO B_12_15 GO:0051701 biological process involved in interaction with host 5/28 204/18986 1.09592372762698e-05 0.00016329263541642 0.0001006519423531 CHMP5/IFITM1/LY6E/PLSCR1/TRIM22 5
MeSH_gene2pubmed B_12_15 D017361 Viral Nonstructural Proteins 5/30 264/26076 1.18641968358761e-05 0.00039684878691597 0.00025755533329445 EIF2AK2/IRF7/ISG15/STAT1/TNFSF10 5
KEGG B_12_15 hsa05165 Human papillomavirus infection 6/15 333/8541 1.24716148212468e-05 6.51295440665111e-05 4.23013836042289e-05 EIF2AK2/IRF9/ISG15/MX1/MX2/STAT1 6
GO B_12_15 GO:0032607 interferon-alpha production 3/28 31/18986 1.25597214156424e-05 0.00017822842770768 0.0001098582148887 IRF7/NMI/STAT1 3
GO B_12_15 GO:0032647 regulation of interferon-alpha production 3/28 31/18986 1.25597214156424e-05 0.00017822842770768 0.0001098582148887 IRF7/NMI/STAT1 3
MeSH_gene2pubmed B_12_15 D053487 DEAD-box RNA Helicases 6/30 465/26076 1.28564326755052e-05 0.00041805366467472 0.00027131732410477 EIF2AK2/IRF7/ISG15/STAT1/TNFSF10/UBE2L6 6
MeSH_gene2pubmed B_12_15 D053634 TYK2 Kinase 4/30 126/26076 1.29208337765201e-05 0.00041805366467472 0.00027131732410477 EIF2AK2/IRF9/ISG15/STAT1 4