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Selected Module: B_12_15


Module Info

Module_Name B_12_15
Cell_Type B
Name B_12_15: response to virus
Meta_Module B_20
Gene_Number 30

Genes:

CHMP5, DDX60, DDX60L, DTX3L, EIF2AK2, EPSTI1, HERC5, IFI44, IFI44L, IFIT2, IFIT3, IFITM1, IRF7, IRF9, ISG15, LY6E, MX1, MX2, NMI, OAS1, OAS2, OAS3, PARP9, PLSCR1, SAMD9L, STAT1, TNFSF10, TRIM22, UBE2L6, XAF1


UMAP Visualizations


UMAP for B_12_15

UMAP for B_12_15


Word Cloud

Enriched TF

Wordcloud for B_12_15
TF p.adjust Genes
ISRE 4.33682855335823e-12 DDX60/DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/IRF9/ISG15/PARP9/XAF1
STTTCRNTTT 6.57893968504148e-10 DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/ISG15/PARP9/XAF1
IRF 2.97425446129766e-09 DDX60/DTX3L/IFI44/IFIT2/IRF9/ISG15/PARP9/UBE2L6
IRF7 1.3940631900746e-07 DDX60/DTX3L/EPSTI1/IFIT2/ISG15/PARP9/XAF1
ICSBP 8.0670788913588e-05 DTX3L/IFI44/IFIT3/ISG15/PARP9
IRF1 8.0670788913588e-05 DTX3L/IRF9/ISG15/PARP9/XAF1
IRF2 0.0036613358814046 DTX3L/PARP9/XAF1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
WikiPathways B_12_15 WP5115 Network map of SARS CoV 2 signaling 7/24 254/8836 3.40053513737725e-06 4.95506548589256e-05 3.78405413783333e-05 IFI44L/IFITM1/IRF9/MX1/OAS2/STAT1/TNFSF10 7
MeSH_gene2pubmed B_12_15 D006515 Hepatitis B virus 6/30 375/26076 3.76931603318897e-06 0.00015534966793928 0.00010082211870729 EIF2AK2/HERC5/IRF9/MX1/STAT1/TNFSF10 6
GO B_12_15 GO:0002758 innate immune response-activating signaling pathway 6/28 297/18986 3.92802208652544e-06 7.09424595020958e-05 4.37282203571732e-05 DDX60/EIF2AK2/IRF7/NMI/OAS1/OAS3 6
MeSH_gene2pubmed B_12_15 D012254 Ribavirin 4/30 97/26076 4.57749093382555e-06 0.00018534822939069 0.00012029122066175 EIF2AK2/IFI44/ISG15/TNFSF10 4
reactome B_12_15 R-HSA-9820952 Respiratory Syncytial Virus Infection Pathway 5/24 120/11146 4.80069818153478e-06 6.78098618141788e-05 4.29536153084691e-05 EIF2AK2/HERC5/ISG15/OAS2/UBE2L6 5
MeSH_gene2pubmed B_12_15 D053594 Myeloid Differentiation Factor 88 5/30 223/26076 5.2353615791843e-06 0.00020833128490961 0.00013520725094699 EIF2AK2/IRF7/IRF9/STAT1/TNFSF10 5
KEGG B_12_15 hsa04217 Necroptosis 5/15 159/8541 5.42303861641974e-06 3.1860351871466e-05 2.06931736679174e-05 CHMP5/EIF2AK2/IRF9/STAT1/TNFSF10 5
GO B_12_15 GO:0002753 cytoplasmic pattern recognition receptor signaling pathway 5/28 178/18986 5.64950674527535e-06 9.45447152069804e-05 5.82764140007703e-05 DDX60/EIF2AK2/IRF7/OAS1/OAS3 5
GO B_12_15 GO:0060339 negative regulation of type I interferon-mediated signaling pathway 3/28 24/18986 5.69460117683799e-06 9.45447152069804e-05 5.82764140007703e-05 ISG15/OAS1/OAS3 3
GO B_12_15 GO:0002218 activation of innate immune response 6/28 317/18986 5.71075460981761e-06 9.45447152069804e-05 5.82764140007703e-05 DDX60/EIF2AK2/IRF7/NMI/OAS1/OAS3 6