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Selected Module: B_12_15


Module Info

Module_Name B_12_15
Cell_Type B
Name B_12_15: response to virus
Meta_Module B_20
Gene_Number 30

Genes:

CHMP5, DDX60, DDX60L, DTX3L, EIF2AK2, EPSTI1, HERC5, IFI44, IFI44L, IFIT2, IFIT3, IFITM1, IRF7, IRF9, ISG15, LY6E, MX1, MX2, NMI, OAS1, OAS2, OAS3, PARP9, PLSCR1, SAMD9L, STAT1, TNFSF10, TRIM22, UBE2L6, XAF1


UMAP Visualizations


UMAP for B_12_15

UMAP for B_12_15


Word Cloud

Enriched TF

Wordcloud for B_12_15
TF p.adjust Genes
ISRE 4.33682855335823e-12 DDX60/DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/IRF9/ISG15/PARP9/XAF1
STTTCRNTTT 6.57893968504148e-10 DTX3L/EPSTI1/IFI44/IFIT2/IFIT3/ISG15/PARP9/XAF1
IRF 2.97425446129766e-09 DDX60/DTX3L/IFI44/IFIT2/IRF9/ISG15/PARP9/UBE2L6
IRF7 1.3940631900746e-07 DDX60/DTX3L/EPSTI1/IFIT2/ISG15/PARP9/XAF1
ICSBP 8.0670788913588e-05 DTX3L/IFI44/IFIT3/ISG15/PARP9
IRF1 8.0670788913588e-05 DTX3L/IRF9/ISG15/PARP9/XAF1
IRF2 0.0036613358814046 DTX3L/PARP9/XAF1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
MeSH_gene2pubmed B_12_15 D014758 Viral Core Proteins 6/30 242/26076 2.95886029337142e-07 1.55205671752301e-05 1.00728665011185e-05 EIF2AK2/IRF9/ISG15/MX1/STAT1/TNFSF10 6
KEGG B_12_15 hsa04621 NOD-like receptor signaling pathway 6/15 189/8541 4.59898323344157e-07 3.08788874245362e-06 2.00557163563617e-06 IRF7/IRF9/OAS1/OAS2/OAS3/STAT1 6
reactome B_12_15 R-HSA-9833482 PKR-mediated signaling 5/24 75/11146 4.63598512106403e-07 8.73110531133726e-06 5.53064891635709e-06 EIF2AK2/HERC5/ISG15/STAT1/UBE2L6 5
GO B_12_15 GO:0039530 MDA-5 signaling pathway 3/28 11/18986 4.70234147917562e-07 9.6641224882368e-06 5.95686815329326e-06 DDX60/IRF7/OAS3 3
MeSH_gene2pubmed B_12_15 D017735 Virus Latency 6/30 266/26076 5.14902037776263e-07 2.64087534041692e-05 1.71393122749853e-05 IRF7/IRF9/MX1/STAT1/TNFSF10/TRIM22 6
GO B_12_15 GO:0050691 regulation of defense response to virus by host 4/28 45/18986 5.40741830355514e-07 1.0396197770706e-05 6.40811201338113e-06 DTX3L/PARP9/STAT1/TRIM22 4
GO B_12_15 GO:0060338 regulation of type I interferon-mediated signaling pathway 4/28 45/18986 5.40741830355514e-07 1.0396197770706e-05 6.40811201338113e-06 IRF7/ISG15/OAS1/OAS3 4
WikiPathways B_12_15 WP5039 SARS CoV 2 innate immunity evasion and cell specific immune response 5/24 66/8836 7.59288898633499e-07 1.29079112767695e-05 9.85743482436472e-06 IFIT2/IFITM1/IRF7/MX1/STAT1 5
MeSH_gene2pubmed B_12_15 D015473 Leukemia, Promyelocytic, Acute 7/30 480/26076 9.67269761893861e-07 4.85317089228485e-05 3.14971366401594e-05 IFIT3/IRF9/ISG15/LY6E/PLSCR1/STAT1/TNFSF10 7
MeSH_gene2pubmed B_12_15 D053613 Janus Kinase 1 6/30 298/26076 9.98564330648155e-07 4.90358824497009e-05 3.1824345856939e-05 EIF2AK2/IRF7/IRF9/ISG15/MX1/STAT1 6