Module Explorer
Instructions
- Enter a module name.
- Click Submit to search for the detailed information of the module.
- Results will appear below if available.
Selected Module: B_12_13
Module Info
| Module_Name | B_12_13 |
| Cell_Type | B |
| Name | B_12_13: ribonucleoprotein complex biogenesis |
| Meta_Module | B_19 |
| Gene_Number | 60 |
Genes:
ANP32B, ATIC, AUP1, BANF1, CBX3, CDC123, CMSS1, COA4, COX20, DCTPP1, DDX56, DKC1, DPH2, EFTUD2, EIF3B, EXOSC7, FAM162A, FKBP4, GFM1, GPATCH4, HAT1, HDAC2, HDHD5, IFRD2, LAS1L, LTV1, LYAR, MFNG, MPHOSPH10, NCL, NDUFAF4, NIFK, NOC2L, NOLC1, NOP14, NOP16, NOP56, NPM1, NUDCD1, NUP62, ODC1, PAK1IP1, PES1, PNO1, PNPT1, POLD2, POLE3, PPP1R14B, RPF2, RPP30, RRP7A, RRP9, RUVBL1, SET, SNRPD3, SYNCRIP, TBRG4, TRIAP1, TRMT6, UMPS
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| MYCMAX | 2.5905944969521e-05 | DCTPP1/IFRD2/LYAR/NCL/NOP56/NPM1/ODC1/SYNCRIP |
| E2F1 | 4.15633532006135e-05 | CBX3/DCTPP1/NCL/NOLC1/NUP62/SYNCRIP/TRMT6 |
| E2F | 4.15633532006135e-05 | CBX3/DCTPP1/NCL/NOLC1/NUP62/SYNCRIP/TRMT6 |
| E2F1DP1 | 4.15633532006135e-05 | CBX3/DCTPP1/NCL/NOLC1/NUP62/SYNCRIP/TRMT6 |
| E2F1DP2 | 4.15633532006135e-05 | CBX3/DCTPP1/NCL/NOLC1/NUP62/SYNCRIP/TRMT6 |
| E2F4DP2 | 4.15633532006135e-05 | CBX3/DCTPP1/NCL/NOLC1/NUP62/SYNCRIP/TRMT6 |
| E2F4DP1 | 4.15633532006135e-05 | CBX3/DCTPP1/NCL/NOLC1/NUP62/SYNCRIP/TRMT6 |
| EPC1 | 0.00084259806510092 | ANP32B/BANF1/CMSS1/HDAC2/NCL/NOP56/TRIAP1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_12_13 | D002166 | Camptothecin | 5/60 | 336/26076 | 0.0010541234468385 | 0.0412398498513086 | 0.0361206338792229 | HAT1/NCL/NOLC1/NPM1/TRIAP1 | 5 |
| MeSH_gene2pubmed | B_12_13 | D034502 | Heterogeneous-Nuclear Ribonucleoprotein D | 3/60 | 88/26076 | 0.00110594987757603 | 0.0412398498513086 | 0.0361206338792229 | NCL/NPM1/SYNCRIP | 3 |
| MeSH_gene2pubmed | B_12_13 | D042002 | Chromatin Assembly and Disassembly | 5/60 | 340/26076 | 0.00111098571543805 | 0.0412398498513086 | 0.0361206338792229 | HDAC2/NCL/NPM1/RUVBL1/SET | 5 |
| GO | B_12_13 | GO:0030687 | preribosome, large subunit precursor | 2/59 | 17/19960 | 0.0011353293408041 | 0.0131515970526827 | 0.00669860630866691 | NOC2L/PES1 | 2 |
| MeSH_gene2pubmed | B_12_13 | D017414 | Ribonucleoprotein, U4-U6 Small Nuclear | 3/60 | 89/26076 | 0.00114266586489772 | 0.0412398498513086 | 0.0361206338792229 | EFTUD2/RRP9/SNRPD3 | 3 |
| GO | B_12_13 | GO:0035097 | histone methyltransferase complex | 3/59 | 70/19960 | 0.00116667393209282 | 0.0131515970526827 | 0.00669860630866691 | HDAC2/LAS1L/RUVBL1 | 3 |
| reactome | B_12_13 | R-HSA-8956320 | Nucleotide biosynthesis | 2/42 | 14/11146 | 0.00122576089203128 | 0.0430767399199563 | 0.034837414826152 | ATIC/UMPS | 2 |
| MeSH_gene2pubmed | B_12_13 | D051788 | Myeloid-Lymphoid Leukemia Protein | 4/60 | 205/26076 | 0.00128224242675027 | 0.0449161979488111 | 0.0393406267773846 | HDAC2/NOLC1/NPM1/SET | 4 |
| MeSH_gene2pubmed | B_12_13 | D008342 | Mandibulofacial Dysostosis | 2/60 | 24/26076 | 0.00139088459234253 | 0.0473298156994272 | 0.0414546355191412 | NOLC1/NOP56 | 2 |
| MeSH_gene2pubmed | B_12_13 | D051863 | Host Cell Factor C1 | 4/60 | 212/26076 | 0.00145057702808642 | 0.047989923345859 | 0.0420328021881181 | EFTUD2/HDAC2/NOC2L/SET | 4 |