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Selected Module: B_12_13
Module Info
| Module_Name | B_12_13 |
| Cell_Type | B |
| Name | B_12_13: ribonucleoprotein complex biogenesis |
| Meta_Module | B_19 |
| Gene_Number | 60 |
Genes:
ANP32B, ATIC, AUP1, BANF1, CBX3, CDC123, CMSS1, COA4, COX20, DCTPP1, DDX56, DKC1, DPH2, EFTUD2, EIF3B, EXOSC7, FAM162A, FKBP4, GFM1, GPATCH4, HAT1, HDAC2, HDHD5, IFRD2, LAS1L, LTV1, LYAR, MFNG, MPHOSPH10, NCL, NDUFAF4, NIFK, NOC2L, NOLC1, NOP14, NOP16, NOP56, NPM1, NUDCD1, NUP62, ODC1, PAK1IP1, PES1, PNO1, PNPT1, POLD2, POLE3, PPP1R14B, RPF2, RPP30, RRP7A, RRP9, RUVBL1, SET, SNRPD3, SYNCRIP, TBRG4, TRIAP1, TRMT6, UMPS
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| MYCMAX | 2.5905944969521e-05 | DCTPP1/IFRD2/LYAR/NCL/NOP56/NPM1/ODC1/SYNCRIP |
| E2F1 | 4.15633532006135e-05 | CBX3/DCTPP1/NCL/NOLC1/NUP62/SYNCRIP/TRMT6 |
| E2F | 4.15633532006135e-05 | CBX3/DCTPP1/NCL/NOLC1/NUP62/SYNCRIP/TRMT6 |
| E2F1DP1 | 4.15633532006135e-05 | CBX3/DCTPP1/NCL/NOLC1/NUP62/SYNCRIP/TRMT6 |
| E2F1DP2 | 4.15633532006135e-05 | CBX3/DCTPP1/NCL/NOLC1/NUP62/SYNCRIP/TRMT6 |
| E2F4DP2 | 4.15633532006135e-05 | CBX3/DCTPP1/NCL/NOLC1/NUP62/SYNCRIP/TRMT6 |
| E2F4DP1 | 4.15633532006135e-05 | CBX3/DCTPP1/NCL/NOLC1/NUP62/SYNCRIP/TRMT6 |
| EPC1 | 0.00084259806510092 | ANP32B/BANF1/CMSS1/HDAC2/NCL/NOP56/TRIAP1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_12_13 | GO:0031970 | organelle envelope lumen | 3/59 | 98/19960 | 0.00305744831230991 | 0.0199538731961278 | 0.0101632630880108 | COA4/PNPT1/TRIAP1 | 3 |
| GO | B_12_13 | GO:0005681 | spliceosomal complex | 4/59 | 207/19960 | 0.00327578034959374 | 0.0199690343967257 | 0.0101709852614902 | EFTUD2/NCL/SNRPD3/SYNCRIP | 4 |
| GO | B_12_13 | GO:0005721 | pericentric heterochromatin | 2/59 | 30/19960 | 0.00354289319941907 | 0.0199690343967257 | 0.0101709852614902 | CBX3/POLE3 | 2 |
| GO | B_12_13 | GO:0071007 | U2-type catalytic step 2 spliceosome | 2/59 | 30/19960 | 0.00354289319941907 | 0.0199690343967257 | 0.0101709852614902 | EFTUD2/SNRPD3 | 2 |
| GO | B_12_13 | GO:0071339 | MLL1 complex | 2/59 | 31/19960 | 0.00378006070038492 | 0.0203794576890318 | 0.010380029383208 | LAS1L/RUVBL1 | 2 |
| GO | B_12_13 | GO:0044665 | MLL1/2 complex | 2/59 | 32/19960 | 0.00402443283806536 | 0.020792902996671 | 0.0105906127317509 | LAS1L/RUVBL1 | 2 |
| GO | B_12_13 | GO:1902555 | endoribonuclease complex | 2/59 | 34/19960 | 0.00453461845207139 | 0.0224917075222741 | 0.0114558781947067 | LAS1L/RPP30 | 2 |
| GO | B_12_13 | GO:1905348 | endonuclease complex | 2/59 | 39/19960 | 0.00593316294965147 | 0.0282966232983378 | 0.0144125415781007 | LAS1L/RPP30 | 2 |
| GO | B_12_13 | GO:1904949 | ATPase complex | 3/59 | 126/19960 | 0.00617258892091477 | 0.0283481861553123 | 0.0144388044933679 | HDAC2/POLE3/RUVBL1 | 3 |
| GO | B_12_13 | GO:0046540 | U4/U6 x U5 tri-snRNP complex | 2/59 | 45/19960 | 0.00783749178653661 | 0.0347088921975193 | 0.0176785529019623 | EFTUD2/SNRPD3 | 2 |