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Selected Module: B_12_1
Module Info
| Module_Name | B_12_1 |
| Cell_Type | B |
| Name | B_12_1: HALLMARK_MYC_TARGETS_V1 |
| Meta_Module | B_3 |
| Gene_Number | 129 |
Genes:
AASDHPPT, ABCE1, ABCF1, ACAA1, AK2, APEH, ATP1A1, ATP5PB, ATP5PO, BMS1, BUD31, C19orf53, CD164, CDC37, CHMP4B, CKS2, CLTB, COA5, COPS5, COQ9, DBI, DCAF13, DCTD, DCXR, DDT, EBP, ECI1, EIF4G2, EIF4H, ETF1, EXOSC5, FARSB, FIBP, FRG1, FXN, GAR1, GET3, GOT2, GRPEL1, GSTO1, GTF2A2, GTF3A, HCFC1R1, HEBP2, HNRNPA3, HTRA2, INO80C, IPO5, ITGAE, ITGB1BP1, KGD4, KHSRP, LSM2, MAD2L2, MALSU1, MCRIP2, MDH1, ME2, MEA1, MED29, MLST8, MPV17, MRPL11, MRPL35, MRPL46, MRPL49, MRPL9, MRPS21, MRPS35, MVD, MZT1, NARS1, NDUFS1, NFU1, NIPA2, NME2, NUBP2, NUTF2, OLA1, PCMT1, PFDN4, PGD, PHAX, PPIA, PPP2CA, PRELID3B, PRPF38A, PSMA6, PSMB8, PSME1, PSME3, PSMG3, PTPA, QDPR, RAB10, RAP1A, RBBP4, RBM17, RBM3, RRP36, RTRAF, RWDD4, SDHAF3, SDHC, SF3B2, SFT2D1, SLC39A3, SMARCA4, SMIM20, SNRNP27, SNRPA1, SNRPD2, SSBP1, SSNA1, SYAP1, TDG, TFDP1, THOC6, TMEM106C, TPD52L2, TRAPPC3, TUBA1C, TXN2, UBB, UBE2D3, UROS, VTI1B, ZDHHC3, ZNF330
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| NR1I2 | 0.00225913858449317 | AK2/BUD31/GTF2A2/MLST8/MRPL11/MRPS21/PPIA/PTPA/RAP1A/RBM17 |
| ELF5 | 0.0190351123169518 | BMS1/C19orf53/FIBP/FRG1/INO80C/RBM3/RTRAF/SF3B2/SSBP1/TUBA1C |
| DMRT1 | 0.0214366259979039 | ATP5PB/MALSU1/MRPL11/MRPL46/PPIA/RBBP4/SNRPA1/TPD52L2/TXN2 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_12_1 | GO:0009199 | ribonucleoside triphosphate metabolic process | 9/124 | 258/18986 | 5.00836594559734e-05 | 0.00655011655939127 | 0.0061809292296954 | AK2/ATP5PB/ATP5PO/MLST8/NDUFS1/NME2/OLA1/PPP2CA/SDHC | 9 |
| GO | B_12_1 | GO:0009060 | aerobic respiration | 8/124 | 200/18986 | 5.11005805643641e-05 | 0.00655011655939127 | 0.0061809292296954 | ATP5PB/ATP5PO/COQ9/FXN/KGD4/MDH1/NDUFS1/SDHC | 8 |
| GO | B_12_1 | GO:0009144 | purine nucleoside triphosphate metabolic process | 9/124 | 259/18986 | 5.16047449811355e-05 | 0.00655011655939127 | 0.0061809292296954 | AK2/ATP5PB/ATP5PO/MLST8/NDUFS1/NME2/OLA1/PPP2CA/SDHC | 9 |
| MeSH_gene2pubmed | B_12_1 | D008291 | Malate Dehydrogenase | 5/128 | 84/26076 | 5.96381503568998e-05 | 0.00741139559435291 | 0.00684554654096663 | GOT2/MDH1/ME2/NDUFS1/PGD | 5 |
| GO | B_12_1 | GO:0009141 | nucleoside triphosphate metabolic process | 9/124 | 274/18986 | 7.95495553292424e-05 | 0.00942397065467092 | 0.00889280292206899 | AK2/ATP5PB/ATP5PO/MLST8/NDUFS1/NME2/OLA1/PPP2CA/SDHC | 9 |
| reactome | B_12_1 | R-HSA-1234174 | Cellular response to hypoxia | 6/107 | 75/11146 | 8.00087396801267e-05 | 0.00377507609603691 | 0.00281656920988295 | PSMA6/PSMB8/PSME1/PSME3/UBB/UBE2D3 | 6 |
| MeSH_gene2pubmed | B_12_1 | D003564 | Cytidine Deaminase | 7/128 | 211/26076 | 8.49631561711606e-05 | 0.0100995334335632 | 0.00932844904597777 | KHSRP/PPIA/PSMA6/PSMB8/PSME1/PSME3/UBB | 7 |
| GO | B_12_1 | GO:0015934 | large ribosomal subunit | 6/127 | 114/19960 | 8.96668899284519e-05 | 0.00211751809292575 | 0.00185868209082459 | MRPL11/MRPL35/MRPL46/MRPL49/MRPL9/RBM3 | 6 |
| reactome | B_12_1 | R-HSA-453279 | Mitotic G1 phase and G1/S transition | 8/107 | 149/11146 | 9.01434143359792e-05 | 0.00377507609603691 | 0.00281656920988295 | PPP2CA/PSMA6/PSMB8/PSME1/PSME3/RBBP4/TFDP1/UBB | 8 |
| GO | B_12_1 | GO:0022613 | ribonucleoprotein complex biogenesis | 12/124 | 492/18986 | 9.22858442108314e-05 | 0.0102494965726655 | 0.00967179933077989 | BMS1/DCAF13/EXOSC5/FRG1/GAR1/GTF3A/LSM2/MALSU1/RRP36/SF3B2/SNRPA1/SNRPD2 | 12 |