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Selected Module: B_12_1


Module Info

Module_Name B_12_1
Cell_Type B
Name B_12_1: HALLMARK_MYC_TARGETS_V1
Meta_Module B_3
Gene_Number 129

Genes:

AASDHPPT, ABCE1, ABCF1, ACAA1, AK2, APEH, ATP1A1, ATP5PB, ATP5PO, BMS1, BUD31, C19orf53, CD164, CDC37, CHMP4B, CKS2, CLTB, COA5, COPS5, COQ9, DBI, DCAF13, DCTD, DCXR, DDT, EBP, ECI1, EIF4G2, EIF4H, ETF1, EXOSC5, FARSB, FIBP, FRG1, FXN, GAR1, GET3, GOT2, GRPEL1, GSTO1, GTF2A2, GTF3A, HCFC1R1, HEBP2, HNRNPA3, HTRA2, INO80C, IPO5, ITGAE, ITGB1BP1, KGD4, KHSRP, LSM2, MAD2L2, MALSU1, MCRIP2, MDH1, ME2, MEA1, MED29, MLST8, MPV17, MRPL11, MRPL35, MRPL46, MRPL49, MRPL9, MRPS21, MRPS35, MVD, MZT1, NARS1, NDUFS1, NFU1, NIPA2, NME2, NUBP2, NUTF2, OLA1, PCMT1, PFDN4, PGD, PHAX, PPIA, PPP2CA, PRELID3B, PRPF38A, PSMA6, PSMB8, PSME1, PSME3, PSMG3, PTPA, QDPR, RAB10, RAP1A, RBBP4, RBM17, RBM3, RRP36, RTRAF, RWDD4, SDHAF3, SDHC, SF3B2, SFT2D1, SLC39A3, SMARCA4, SMIM20, SNRNP27, SNRPA1, SNRPD2, SSBP1, SSNA1, SYAP1, TDG, TFDP1, THOC6, TMEM106C, TPD52L2, TRAPPC3, TUBA1C, TXN2, UBB, UBE2D3, UROS, VTI1B, ZDHHC3, ZNF330


UMAP Visualizations


UMAP for B_12_1

UMAP for B_12_1


Word Cloud

Enriched TF

Wordcloud for B_12_1
TF p.adjust Genes
NR1I2 0.00225913858449317 AK2/BUD31/GTF2A2/MLST8/MRPL11/MRPS21/PPIA/PTPA/RAP1A/RBM17
ELF5 0.0190351123169518 BMS1/C19orf53/FIBP/FRG1/INO80C/RBM3/RTRAF/SF3B2/SSBP1/TUBA1C
DMRT1 0.0214366259979039 ATP5PB/MALSU1/MRPL11/MRPL46/PPIA/RBBP4/SNRPA1/TPD52L2/TXN2


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
GO B_12_1 GO:0071005 U2-type precatalytic spliceosome 5/127 50/19960 1.62299702518471e-05 0.00071180012390243 0.00062479283977035 LSM2/PRPF38A/SF3B2/SNRPA1/SNRPD2 5
reactome B_12_1 R-HSA-69656 Cyclin A:Cdk2-associated events at S phase entry 7/107 85/11146 1.64589358063268e-05 0.00136838503791511 0.00102094661591121 PSMA6/PSMB8/PSME1/PSME3/RBBP4/TFDP1/UBB 7
MeSH_gene2pubmed B_12_1 D019427 HIV Integrase 6/128 109/26076 1.66552595342187e-05 0.00284596747290962 0.0026286820804336 IPO5/PPIA/PSMA6/PSMB8/PSME1/PSME3 6
reactome B_12_1 R-HSA-69275 G2/M Transition 10/107 197/11146 1.87896498872288e-05 0.00136838503791511 0.00102094661591121 MZT1/PPP2CA/PSMA6/PSMB8/PSME1/PSME3/RBBP4/SSNA1/TUBA1C/UBB 10
reactome B_12_1 R-HSA-453274 Mitotic G2-G2/M phases 10/107 199/11146 2.05070769083571e-05 0.00136838503791511 0.00102094661591121 MZT1/PPP2CA/PSMA6/PSMB8/PSME1/PSME3/RBBP4/SSNA1/TUBA1C/UBB 10
reactome B_12_1 R-HSA-450531 Regulation of mRNA stability by proteins that bind AU-rich elements 7/107 88/11146 2.0676147550915e-05 0.00136838503791511 0.00102094661591121 EXOSC5/KHSRP/PSMA6/PSMB8/PSME1/PSME3/UBB 7
GO B_12_1 GO:0071011 precatalytic spliceosome 5/127 53/19960 2.1649520532269e-05 0.00079210458527765 0.00069528124063459 LSM2/PRPF38A/SF3B2/SNRPA1/SNRPD2 5
GO B_12_1 GO:0044391 ribosomal subunit 8/127 186/19960 2.54907987540552e-05 0.00079210458527765 0.00069528124063459 MRPL11/MRPL35/MRPL46/MRPL49/MRPL9/MRPS21/MRPS35/RBM3 8
MeSH_gene2pubmed B_12_1 D003641 Deamination 5/128 71/26076 2.64650934115519e-05 0.00413711962785432 0.00382125668471972 PSMA6/PSMB8/PSME1/PSME3/TDG 5
MeSH_gene2pubmed B_12_1 D009700 Nucleoside Deaminases 6/128 119/26076 2.7422781053604e-05 0.00413711962785432 0.00382125668471972 PPIA/PSMA6/PSMB8/PSME1/PSME3/UBB 6