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Selected Module: B_12_1
Module Info
| Module_Name | B_12_1 |
| Cell_Type | B |
| Name | B_12_1: HALLMARK_MYC_TARGETS_V1 |
| Meta_Module | B_3 |
| Gene_Number | 129 |
Genes:
AASDHPPT, ABCE1, ABCF1, ACAA1, AK2, APEH, ATP1A1, ATP5PB, ATP5PO, BMS1, BUD31, C19orf53, CD164, CDC37, CHMP4B, CKS2, CLTB, COA5, COPS5, COQ9, DBI, DCAF13, DCTD, DCXR, DDT, EBP, ECI1, EIF4G2, EIF4H, ETF1, EXOSC5, FARSB, FIBP, FRG1, FXN, GAR1, GET3, GOT2, GRPEL1, GSTO1, GTF2A2, GTF3A, HCFC1R1, HEBP2, HNRNPA3, HTRA2, INO80C, IPO5, ITGAE, ITGB1BP1, KGD4, KHSRP, LSM2, MAD2L2, MALSU1, MCRIP2, MDH1, ME2, MEA1, MED29, MLST8, MPV17, MRPL11, MRPL35, MRPL46, MRPL49, MRPL9, MRPS21, MRPS35, MVD, MZT1, NARS1, NDUFS1, NFU1, NIPA2, NME2, NUBP2, NUTF2, OLA1, PCMT1, PFDN4, PGD, PHAX, PPIA, PPP2CA, PRELID3B, PRPF38A, PSMA6, PSMB8, PSME1, PSME3, PSMG3, PTPA, QDPR, RAB10, RAP1A, RBBP4, RBM17, RBM3, RRP36, RTRAF, RWDD4, SDHAF3, SDHC, SF3B2, SFT2D1, SLC39A3, SMARCA4, SMIM20, SNRNP27, SNRPA1, SNRPD2, SSBP1, SSNA1, SYAP1, TDG, TFDP1, THOC6, TMEM106C, TPD52L2, TRAPPC3, TUBA1C, TXN2, UBB, UBE2D3, UROS, VTI1B, ZDHHC3, ZNF330
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| NR1I2 | 0.00225913858449317 | AK2/BUD31/GTF2A2/MLST8/MRPL11/MRPS21/PPIA/PTPA/RAP1A/RBM17 |
| ELF5 | 0.0190351123169518 | BMS1/C19orf53/FIBP/FRG1/INO80C/RBM3/RTRAF/SF3B2/SSBP1/TUBA1C |
| DMRT1 | 0.0214366259979039 | ATP5PB/MALSU1/MRPL11/MRPL46/PPIA/RBBP4/SNRPA1/TPD52L2/TXN2 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_12_1 | D019065 | Virus Assembly | 8/128 | 194/26076 | 5.42096537567585e-06 | 0.00114007071823829 | 0.00105302801103209 | ABCE1/CHMP4B/PPIA/PSMA6/PSMB8/PSME1/PSME3/UBB | 8 |
| GO | B_12_1 | GO:0006163 | purine nucleotide metabolic process | 13/124 | 440/18986 | 6.20335604826872e-06 | 0.0022046727395547 | 0.00208040972313517 | AK2/ATP5PB/ATP5PO/DCXR/MDH1/ME2/MLST8/NDUFS1/NME2/OLA1/PGD/PPP2CA/SDHC | 13 |
| MeSH_gene2pubmed | B_12_1 | D007506 | Iron-Sulfur Proteins | 6/128 | 93/26076 | 6.68347036606838e-06 | 0.00130518628434507 | 0.0012055372487367 | ABCE1/FXN/NDUFS1/NFU1/NUBP2/SDHC | 6 |
| WikiPathways | B_12_1 | WP183 | Proteasome degradation | 6/73 | 62/8836 | 1.10092319745361e-05 | 0.0019486340594929 | 0.00173829978545307 | PSMA6/PSMB8/PSME1/PSME3/UBB/UBE2D3 | 6 |
| GO | B_12_1 | GO:0006739 | NADP metabolic process | 5/124 | 46/18986 | 1.21228006592045e-05 | 0.00302166090898383 | 0.00285134960045685 | DCXR/MDH1/ME2/MLST8/PGD | 5 |
| MeSH_gene2pubmed | B_12_1 | D016963 | D016963 | 5/128 | 62/26076 | 1.36256169256967e-05 | 0.00248349577832365 | 0.00229388456173659 | FARSB/FXN/MRPS21/MRPS35/NARS1 | 5 |
| GO | B_12_1 | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | 11/124 | 338/18986 | 1.36510121911283e-05 | 0.00302166090898383 | 0.00285134960045685 | BUD31/FRG1/HNRNPA3/LSM2/PRPF38A/RBM17/RBM3/SF3B2/SNRNP27/SNRPA1/SNRPD2 | 11 |
| GO | B_12_1 | GO:0000398 | mRNA splicing, via spliceosome | 11/124 | 338/18986 | 1.36510121911283e-05 | 0.00302166090898383 | 0.00285134960045685 | BUD31/FRG1/HNRNPA3/LSM2/PRPF38A/RBM17/RBM3/SF3B2/SNRNP27/SNRPA1/SNRPD2 | 11 |
| reactome | B_12_1 | R-HSA-69202 | Cyclin E associated events during G1/S transition | 7/107 | 83/11146 | 1.40640444999274e-05 | 0.00136838503791511 | 0.00102094661591121 | PSMA6/PSMB8/PSME1/PSME3/RBBP4/TFDP1/UBB | 7 |
| GO | B_12_1 | GO:0140053 | mitochondrial gene expression | 8/124 | 169/18986 | 1.53038537877628e-05 | 0.00302166090898383 | 0.00285134960045685 | MALSU1/MRPL11/MRPL35/MRPL46/MRPL49/MRPL9/MRPS21/MRPS35 | 8 |